Gene YpsIP31758_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0623 
SymbolflhB 
ID5385674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp735142 
End bp736275 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content44% 
IMG OID640863594 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001399615 
Protein GI153947127 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAACA GCAGTGGTGA GAAGAGTGAA AAACCCACAA CGGGGAAGCT GTCGAAAGCC 
AGAAAAAAAG GCGATATCCC CCGCTCTAAA GATGTCACCA TGGCCGCGGG GTTAGTGACC
TCTTTTATTC TGCTATCGCT ATTTCTACCT TATTATAAAG AATTGATTTC TCAATCGTTT
GTGTCTGTTT CTCAGTTGGC AAGTCAGCTT AATGACCAAG GCGCTCTTGA GCAATTTCTG
CTGGCTAATC TGTTTATTTT CGCCAAATTC TTAGCCACGC TGGTCCCGAT CCCGTTGTTC
AGTATGCTGG CAACCTTAAT ACCCGGTGGG TGGAATTTCA CCCCGGTAAA ACTGATACCC
GACCTGAAAA AACTTAGCCC GTTAGCGGGG ATTAAGAGAA TATTCTCTGC CAGCAATGGC
ACTGAAGTGC TTAAGATGTT GGCAAAATGC AGCATCGTGC TGTACACCCT CTATCTGGTC
GTGCATAGCT CGCTTGATGA TTTATTGCAC TTGCAGACAC TGCCACTAGA AGAAGCGATT
ACGCAGGGAT TTGCCCAGTA CCACCATATT TTGTTGTATT TCATCGCGAT TGTTGTCGTC
TTTGCCATCA TTGATATTCC TCTCAGTCAT CATCTGTTTA CCAAAAAAAT GAAAATGACC
AAACAGGAGG TCAAACAAGA GCATAAAAAT AATGATGGTA ATCCAGAAAT TAAATCTCGG
GTCCGTCAAC TACAACGCCA ATATGCTATC GGTCAAATTA ATAAAACGGT TCCCAGCGCC
GACGTTATTA TTACTAACCC AACCCATTTC TCAGTTGCAT TAAAATATGC ACCCGAAAAA
GCCAGTGCTC CCTATATTGT CGCCAAAGGG AAAGATGATA TTGCCTTGTA TATTCGGAGT
ATTGCGCAAA AACACAAAAT AGAAATTGTC GAGTTTCCAC CATTAGCGCG TGCTATTTAC
CATACCACCA AGGTTAACCA ACAGATACCC GCCCAGCTTT ATCGTGCTAT CGCTCAGGTG
CTGACCTATG TCATGCAGAT CAAGTCATGG CGTTCCGGGC AGGCAAGCAA GCCGGTATTA
AATACTCACC TTGGGCTTCC TAAAGAGATG CAACGATTCC ATGATGAAAC ATAA
 
Protein sequence
MSNSSGEKSE KPTTGKLSKA RKKGDIPRSK DVTMAAGLVT SFILLSLFLP YYKELISQSF 
VSVSQLASQL NDQGALEQFL LANLFIFAKF LATLVPIPLF SMLATLIPGG WNFTPVKLIP
DLKKLSPLAG IKRIFSASNG TEVLKMLAKC SIVLYTLYLV VHSSLDDLLH LQTLPLEEAI
TQGFAQYHHI LLYFIAIVVV FAIIDIPLSH HLFTKKMKMT KQEVKQEHKN NDGNPEIKSR
VRQLQRQYAI GQINKTVPSA DVIITNPTHF SVALKYAPEK ASAPYIVAKG KDDIALYIRS
IAQKHKIEIV EFPPLARAIY HTTKVNQQIP AQLYRAIAQV LTYVMQIKSW RSGQASKPVL
NTHLGLPKEM QRFHDET