Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1912 |
Symbol | rplD |
ID | 5378151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 2184823 |
End bp | 2185443 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640843421 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001379099 |
Protein GI | 153004774 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.224726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAGT TCGACGTCTA CGACCTCGAC AAGAAGAAGG TGGGCGAGAT CGAGCTCGCC GACGCCGTCT TCGCGGGCGA GGTGAACGAG CACCTCTTCT ACGAGGTGGT GAAGGCGAAG CTCGCCTCCG ATCGCTCGGG CACCCACGCC GTGAAGAACC GGTCCCTCGT GTCCGGCGGC GGCAAGAAGC CCTGGAAGCA GAAGCACACC GGTCGCGCCC GTCAGGGCTC GACGCGGGCG TCGCAGTGGG TGGGCGGCGG CAAGGCCATG GGGCCGAAGC CGCGCGACTA CTCCTACGAC GTTCCGAAGA AGGTCCGGAA GGCGGCCCTG CGCTCGGCGC TCGCGCTCCG CAGCCAGGAG CAGAAGCTCG TCATCGTGCA GGAGTGGAAG CCGGCCGAGC CGAAGACCTC CGCCGCGGCG AAGGTGCTCG CGAAGCTCGG CGCGAGGAAG GCGCTCGTGG TGGACGCGGC CGCGAACGCC GCGCTCGCGA GGAGCGTGCG GAACCTCGAC GGCTCGGACT TCCTCGCGGC CGAGGGGCTC AACGTCTACG ACATCCTGAA GCACGACGCG CTCGTGCTGA CGGCCGAGAC CGCGAAGATG CTGGAGGCCA GCCTGTCATG A
|
Protein sequence | MAKFDVYDLD KKKVGEIELA DAVFAGEVNE HLFYEVVKAK LASDRSGTHA VKNRSLVSGG GKKPWKQKHT GRARQGSTRA SQWVGGGKAM GPKPRDYSYD VPKKVRKAAL RSALALRSQE QKLVIVQEWK PAEPKTSAAA KVLAKLGARK ALVVDAAANA ALARSVRNLD GSDFLAAEGL NVYDILKHDA LVLTAETAKM LEASLS
|
| |