| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3939 |
|---|
| Symbol | |
|---|
| ID | 5381265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1353609 |
|---|
| End bp | 1355411 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640836625 |
|---|
| Product | chloride channel core |
|---|
| Protein accession | YP_001372473 |
|---|
| Protein GI | 153011259 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.194745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGGC AAAACGAGTT TCGAAGACCG CACGATTTCA CCGGCGGCGT CGCGCGCCGC
GTCGCGGGCG ATTTTACCGC CGACAGGCGA ATGCTGCTCC TGATCGCGAT GGCGATCGTC
ATCGGTGCCG CCAGCACCGC TGCCGCATGG GTGCTTGTAA GCCTGATCGC CCTGGTCACC
AATCTGGTCT GGTTTGGCCG CATCAGCATT GACCCGGCAA CACTGGCGCA CCTTTCGCCG
TCCTTCTGGA TCGTGCTCAT CCCCGTGGTG GGTGGTCTCG CAATCGGGCT GATGGCACGT
TACGGCTCCG AGAAAATTCG CGGGCACGGT ATTCCGGAAG CAATCGAAGC CATCCTGATC
GGCGGCAGTC GCATGTCGCT CAAAGTGGCG ATACTGAAGC CACTTTCATC GGCGATCTCG
ATCGGTACAG GCGGCCCCTT TGGCGCCGAA GGTCCGATCA TCATGACGGG CGGAGCTATC
GGATCGCTTT TTGCGCAATT GTTTCAGATG AGTTCAGCCG AGCGGAAGAC CTTGCTCGTG
GCCGGTGCCG CCGCAGGCAT GACCGCCATT TTCGGTACGC CCATTGCCGC CGTGATGCTG
GGCGTCGAAT TGCTGCTCTT CGAGTGGAAG CCCCGCAGCT TCATTCCTGT GGCAGCTGCA
GCAGCAGTCG CTCACACAAA CCGACCCTTG TTTTTCGAAA CAGGTCCGCT GTTCCAGACC
CATTTTCATC TGGCATTGCC CTGGTGGGGA ATAGTCGCAT GTGCCCTGAT CGGCATTGTC
GCCGGCCTGC AATCCGGCTT GCTCACGACC CTTCTCTACA AGCTGGAAGA TGCATTCGAG
CGACTGCCCA TTCACTGGAT GTGGTGGCCG GCAATCGGCG GCATCGCCAT CGGCATTGGC
GGTCTGATCG AACCGCGCGC GCTTGGTGTC GGCTATGATC TCATCGACGG TTTCCTCAAT
GATAAATTTC TGGCAACCAC AGTGCTGGTG GTCCTGCTTG TCAAAAGCGC AATCTGGCTC
TGCGCTCTGG CATCGGGCAC GTCCGGCGGT GTTTTGGCCC CGCTTCTGAT CTTCGGCGGC
GCGATGGGCT GGCTGCTGGG CTTGATCTTG CCAGGCGGCG AACCCGGCTT CTGGGCGCTG
CTCGGAATGG CCGCCATGAT GGGCGGCACG ATGCGCGCAC CGCTGACCGG CACGTTCTTT
GCAGTTGAAG TCACTGGCGA TTTCGGCCAG ATCGTTCCGG TGTTCGTGGC GACGGTAACC
GCCTATGCGG TCACGGTTCT TCTGCTCAAG CGTTCAATCC TGACCGAGAA AATTGCGCGG
CGCGGACAGC ACATCACGCG CGAATATGGC GTAAGCCCGT TCGAGTTCGC CCGTGTGCAT
GAAGTCATGG TGACGAATGT GGACACGCTA CCGGGAAGCA TGACCGTGCA GGAAGCCTCT
GCCTTTTTTG CCTCGGAAGC GGCACGGCAT CGACTTTATC CGGTCATCGA TAACGACCGG
ATACTGATCG GCATGGTGAC GCGCGCTGAT GCGCTGGAAT GGCAGCGGAA GACGGATTTG
TCCAGCCAGA CGCTTGCAGA TGCCGTTTCC GACACCTCCA CACCTGTCGG CCATCAGGAC
GACAGCGTGG CGTTCATCAC CGACATGATG ATCGCGACTG ATTGTGGACG TATCCCGATT
GTGACACGCG ACGGAAAACT CTGCGGACTG GTCAGCCGAA AAGACCTCTT GCAACTGAGA
GGCCAGATCA ACGGCAGTGA AATGGAACGG AAATCCTTCC TGCGCACGGC AGAAGCTGGC
TAA
|
|---|
| Protein sequence | MARQNEFRRP HDFTGGVARR VAGDFTADRR MLLLIAMAIV IGAASTAAAW VLVSLIALVT
NLVWFGRISI DPATLAHLSP SFWIVLIPVV GGLAIGLMAR YGSEKIRGHG IPEAIEAILI
GGSRMSLKVA ILKPLSSAIS IGTGGPFGAE GPIIMTGGAI GSLFAQLFQM SSAERKTLLV
AGAAAGMTAI FGTPIAAVML GVELLLFEWK PRSFIPVAAA AAVAHTNRPL FFETGPLFQT
HFHLALPWWG IVACALIGIV AGLQSGLLTT LLYKLEDAFE RLPIHWMWWP AIGGIAIGIG
GLIEPRALGV GYDLIDGFLN DKFLATTVLV VLLVKSAIWL CALASGTSGG VLAPLLIFGG
AMGWLLGLIL PGGEPGFWAL LGMAAMMGGT MRAPLTGTFF AVEVTGDFGQ IVPVFVATVT
AYAVTVLLLK RSILTEKIAR RGQHITREYG VSPFEFARVH EVMVTNVDTL PGSMTVQEAS
AFFASEAARH RLYPVIDNDR ILIGMVTRAD ALEWQRKTDL SSQTLADAVS DTSTPVGHQD
DSVAFITDMM IATDCGRIPI VTRDGKLCGL VSRKDLLQLR GQINGSEMER KSFLRTAEAG
|
|---|
| |