| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3347 |
|---|
| Symbol | |
|---|
| ID | 5382267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 680815 |
|---|
| End bp | 682356 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640836029 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001371882 |
|---|
| Protein GI | 153010668 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0920182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGAT TGCCGTCAGC GACTGCGCGC GCCGATACCG CGCCTATCTT GCTCAAGCTG
GATTCCGTTT CCAAAGAATT TCCAGGCGTC AAAGCCCTGT CGAATGTCAG CTTCGAATTG
CGGGCGGGCG AGGTTCATGC CGTCTGCGGC GAGAATGGTG CGGGCAAGTC TACCCTAATG
AAGATCGTCA GTGGCGTCTA TCAGCCGGAT GGCGGAACGA TCCATTATCG CGACCAGACT
GTCCGCTTTG CTTCCACGCT TGAATCGGAA GCGGCGGGCA TCGCCATCAT CCATCAGGAA
CTGAACCTCG TTCCGCATCT GAGCGTTGCC GAAAACATCT ATCTCGCTCG CGAGCCGAAA
CGCGGTTTCT TCGTCGACCG CCGCAAGCTG AAGCAGGACG CGCAGCACTG CCTCGATCGG
CTTGGCGTCA AGATCGACCC GTCTGCACAG GTGCTGAACC TGTCCGTCGC CCAATGCCAG
ATGGTCGAAA TCGCCAAGGC CCTCTCGCTC AATGCCTCCG TCCTCATCAT GGACGAACCG
ACCTCCTCGC TGACCGAGCA GGAAGCGCAG CTTCTGTTCA AGGTCATCCG CGAACTGAAA
GCGCAAGGCA CCGGCATCGT CTATATTTCG CACCGTCTCG ATGAAATGGC GGAGATCGTC
GACCGCGTCA CCATCCTGCG CGACGGACGC TATGTCTGGA CCAAGGACTT TGACGCTGTC
ACCGTCGATG AAATCGTGGC CGGGATGGTC GGGCGCTCGC TTGATGAAAA GTTTCCGGAA
CCGACCCGAA AGCTGACGGA GGAAGTGATT TTCTCCGTCA GCGGACTGAC GCGAAGCGGC
CTCTTCGAGA ATATCGGCTT TGAACTCCGG CGCGGAGAAA TCCTCGGCTT TGCCGGACTG
ATGGGCGCAG GGCGCACGGA AGTAGCGCGG GCGATTTTCG GCGCCGATCC GCACGATGCC
GGAACGATTG TGCTTGAAGG TGAGACGCTT TCCATCTCCA GCCCGCGCGA CGCCATCGAG
GCAGGCATTG CCTATCTGTC TGAAGACCGC AAGGCGCAAG GACTGGCGGT CAAGATGCCG
GTCGACGCCA ATCTCACACT CGCCAATATG GAAGCGGTCA GCAGCTCATA TGGCGTGATC
GATTTCGAGC GACAGCGGCA GGCGAGCCAG CGTTATGTCG ATCTTCTCAA TATCAAGACG
CCGGGGCTGG CCCAGCCCGT TCGACTGCTT TCGGGCGGCA ATCAGCAGAA GATCATCATC
GGCAAATGGC TGTTCCGCGA ACCGCGTATC ATGTTCTTCG ATGAACCGAC GCGAGGCATC
GATGTCGGTG CAAAGTTCGC GATCTACCAG ATCATGGACG AACTGGCCGC AAGGGGCATC
GGCATTGTGC TGATCAGCTC GGAGCTACCG GAAATTCTGG GGCTTTCGGA CCGTGTGGCG
GTCTTTCACG AGGGGCGCAT CACCGCCGTC TTGAACACGG CCGCGACATC GCAGGAAGAA
ATCATGACCT ATGCCTCCGG TCGGGGCCGG CAGGACAAAT GA
|
|---|
| Protein sequence | MGGLPSATAR ADTAPILLKL DSVSKEFPGV KALSNVSFEL RAGEVHAVCG ENGAGKSTLM
KIVSGVYQPD GGTIHYRDQT VRFASTLESE AAGIAIIHQE LNLVPHLSVA ENIYLAREPK
RGFFVDRRKL KQDAQHCLDR LGVKIDPSAQ VLNLSVAQCQ MVEIAKALSL NASVLIMDEP
TSSLTEQEAQ LLFKVIRELK AQGTGIVYIS HRLDEMAEIV DRVTILRDGR YVWTKDFDAV
TVDEIVAGMV GRSLDEKFPE PTRKLTEEVI FSVSGLTRSG LFENIGFELR RGEILGFAGL
MGAGRTEVAR AIFGADPHDA GTIVLEGETL SISSPRDAIE AGIAYLSEDR KAQGLAVKMP
VDANLTLANM EAVSSSYGVI DFERQRQASQ RYVDLLNIKT PGLAQPVRLL SGGNQQKIII
GKWLFREPRI MFFDEPTRGI DVGAKFAIYQ IMDELAARGI GIVLISSELP EILGLSDRVA
VFHEGRITAV LNTAATSQEE IMTYASGRGR QDK
|
|---|
| |