Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1142 |
Symbol | tbpA |
ID | 5378622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 1202605 |
End bp | 1203609 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640833794 |
Product | thiamine transporter substrate binding subunit |
Protein accession | YP_001369691 |
Protein GI | 153008476 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.493947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTTT TATCTTTGCT GGCCTTTTCA TTCTCCACAG CCCTCGCTTT CACGCCTTCT GCGCAGGCGA AGGACAAGCT CACTGTTTAT ACCTATGACA GTTTCGTTTC CGAATGGGGT CCGGGCCCGA AGATCAAGGA AAACTTCGAG AAGGAATGCG ATTGCGAAGT GGACTGGATC GCTTCGGCCG ACGGTGTCGC GCTGCTCAAC CGCCTGAAGC TTGAAGGTGG CAATACCAAA GCCGATATCG TCCTCGGTCT CGATACCAAT CTGACGACCG AAGCACGCGC CACCGGCTTT TTTGCTCCAA GCGGCATCGA CCAAAGCAAT GTGAGCATTC CGGGCGGGTT CAAGGACAAT ATCTTCGTTC CCTATGATTA TGGCTACTTC GCCGTGGTTT ACGATTCGGA AAAATTGCCC AATCCGCCCA AGAGCCTGAA AGAACTGGTG GAAGGCGATG CTTCCCAGAA GATCGTGCTG CAAGACCCGC GCACGTCGAC GCCAGGGCTG GGCATGTTGC TCTGGATGAA ATCGGTTTAT GGCGACGAAG CGGAAGCGGC CTGGCAGAAA CTGCAGAAGC GTGTTCTCAC CGTCACACCC GGCTGGTCGG AAGCCTATGG TCTTTTCACC AAGGGTGAAG CGCCGATGGT GCTGTCCTAT ACAACGTCTC CCGCCTATCA CATGATTGCG GAAAAGACGG AGCGCTATAA GGCTCTGGCC TATCCGGAAG GTAATTATCT CCAGATCGAG CTGGCCGCCC AGACCACCAC TGGTGCGAAA AATCCACTGG CACAAAAGTT CCTGGCTTTC ATGACCAGCC CCGGCTTTCA GGATGTTATT CCTGAAACCA ACTGGATGTA TCCAGCGAGC AAGACATCCA CCCCGCTTCC AGCCGCTTTC GACGCGATGC CGAAGCCGGA AAAGACTCTT CTCCTGCCTT CCGACGAAGT AGCCAAGAAC CGGAAGTCAT GGGTCGATGA ATGGCTGGCG GCGACCAGTA AATGA
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Protein sequence | MRLLSLLAFS FSTALAFTPS AQAKDKLTVY TYDSFVSEWG PGPKIKENFE KECDCEVDWI ASADGVALLN RLKLEGGNTK ADIVLGLDTN LTTEARATGF FAPSGIDQSN VSIPGGFKDN IFVPYDYGYF AVVYDSEKLP NPPKSLKELV EGDASQKIVL QDPRTSTPGL GMLLWMKSVY GDEAEAAWQK LQKRVLTVTP GWSEAYGLFT KGEAPMVLSY TTSPAYHMIA EKTERYKALA YPEGNYLQIE LAAQTTTGAK NPLAQKFLAF MTSPGFQDVI PETNWMYPAS KTSTPLPAAF DAMPKPEKTL LLPSDEVAKN RKSWVDEWLA ATSK
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