| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3956 |
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| Symbol | |
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| ID | 5372355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4705071 |
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| End bp | 4706000 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640832218 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001368140 |
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| Protein GI | 153002459 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATTA ATGATTTAGC TTTGTTCGTG CGAGTCGCTG ATTGCGGCAA TATATCTGCC
GCAGCAGCCG AGATGGATAT CTCCGCCGCT TCTGCCAGCG CGGCAATAAA ACGGCTTGAA
AAACAGCTCG ATACTAGCTT ATTTATCCGC ACGACACGCA GCTTACGTTT GACTGTGCAA
GGTGAACGTT ATCTTATTCA TTGCCGACGA GCGCTAAGCG ATTTAGCGCT TGGCGAACAG
GCTATCGCCA GTGATAAAGG TAAAATATCT GGCACTTTAA GCCTGTCGGT TTCTTCAGAC
TTTGGCCGTA ATTTGTTTGT GCCTTGGCTC GACGAGTTTT TGCTCGATTT TCCTCAACTG
CAAGTGCGCT TGCACCTTGG GGACAATATC AGCAGTTTTT ACCACGATAA AATTGATGTC
GCCGTGCGCT ATGGAAAACC GCAGGATTCT AACCAAGTGG CTTTTCCTAT CTGCAGTGTT
GATCGTGTCT TGTGCGCCTC ACCTGAATAT CTCGCCAAGT TTGGTGTGCT TAATTCATTA
GAACAATTAG TTGAGCATAA TTGCTTGTTT TATAAGTTGG ATGGTCGCAC CCACGATCAA
TGGCTATTTA GGCGTGATGG TCAAGAATTC AAAGTGCGTG TCACGGGCAA TCGTAGTGCT
AATGATGCCG AGATTGCCGG CCGTTGGGCT GTGGCTGGCA AAGGGTTGGT ATTTAAGTCG
AGTCTAGATC TGGCCGATGA CTTAATCTCA GGGCGGTTAG TACGTTTGTT GCCTGAGTAT
CAGGGGGAAC CCGTCGATTT ATACTTAGTG TGCCCAGGAC GTGAGCATGT CACTCCCGTG
GTGTTACTGC TTCGCGAAAT GTTACGTCAA CGTTGTAAAG AGTTGCAAAT GCAGTTGGCG
GCTCGTCATA TTCTCCCACA ACACCCTTAA
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| Protein sequence | MLINDLALFV RVADCGNISA AAAEMDISAA SASAAIKRLE KQLDTSLFIR TTRSLRLTVQ
GERYLIHCRR ALSDLALGEQ AIASDKGKIS GTLSLSVSSD FGRNLFVPWL DEFLLDFPQL
QVRLHLGDNI SSFYHDKIDV AVRYGKPQDS NQVAFPICSV DRVLCASPEY LAKFGVLNSL
EQLVEHNCLF YKLDGRTHDQ WLFRRDGQEF KVRVTGNRSA NDAEIAGRWA VAGKGLVFKS
SLDLADDLIS GRLVRLLPEY QGEPVDLYLV CPGREHVTPV VLLLREMLRQ RCKELQMQLA
ARHILPQHP
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