Gene Shew185_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1623 
Symbol 
ID5370590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1967810 
End bp1970617 
Gene Length2808 bp 
Protein Length935 aa 
Translation table11 
GC content41% 
IMG OID640829822 
ProductTonB-dependent receptor 
Protein accessionYP_001365832 
Protein GI153000151 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.85263e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGA ACAACTTCTT AGCAAACTCA GTTCGCTTTG CTTTAATTGG TGGTGTCACA 
GTTGCTGCTT TAAACGCGCC AGTCGCAGTT GCTGCTGATG ATGGAGCTAA AAAAGTAGAA
CGTATTGAAG TAACGGGTTC TCGTATCAAA CGAACGGATA TGGAAGCGGC TAGTCCAGTT
TTAGTGATGA ATCGTGAAGA GCTTGAAGCA ACTGGTATGA TCAGTATTGG TGATATCTTA
CAAACCATTC CAGCTGCGGG TTCTGCGCTA AATACTTCAT TCAACAACGG CGGTGATGGT
TCAACTAACA TGGACCTACG TAACCTAGGA GCTCAACGCT TATTGGTGCT TGTCAATGGC
AAGCGCTGGA TCTCCTCTTT AGGTTCAACA GTCGACTTAA ATACCATTCC TACATCTGCA
ATCGAACGCA TTGAAGTCCT TAAAGACGGT GCTTCAGCTG TTTATGGTTC GGATGCTATT
GCTGGTGTAA TTAACATCAT CACACGCAAG AATTTTGAAG GCGTTGAAGT TTCAGTTTAT
GGTGGCCAAA ACGCAAAATA CGATGATGGC CGTCAATATA CTGCAGATAT TACCTTTGGC
TCTGTATCTG AGAAAGGTGG CTTGTTATTC AATATGAGTC ATGTCACTCA GCAACCAATT
TGGGCTGGCG ATAGGGATAT ATCAGCAACG GGTTATAGCT CAACGGCTGA TAATACACGT
ATTCGAGTTA AAGGTTCACA GATGAACCAA GCCAACCAAG ATGCATTAGC TGCTGTGGGT
TCACCAAACT CATCTGGCAT ATATGATTTT ATGGCGAAGG AAGGTACTGG TGTTAACGTA
GGTGTTGATC AATTACGTCC GCGTACTGGT AGCGATGTAT ATAACTATGC ACCTGATAAT
TATCTATCAA CACCTCAAAA TCGTAATTCT TTCTATGTAC AAGGTTTTTA TGATATTTCA
GACAATTTAA GAGTTGTTTC TGACTTTATG ATGACCAACC GTAAGTCGTC TCAAGAATTA
GCACCTATGC CGTTAACGTT AGGTGCATCA TTCGGTGCCG CAGCGAGTCG TGTTGATATT
GGTGCAAATA ATATTTACAA CCCATTTGGT GAAACGCTAT ATGGCGATAG CGCTCGTGCA
GCCGCAAACG GCCAAGCAGG ATATGTACCT TATGCATTAC AGCGTCGTAT GATTGAAGCT
GGCTCACGTC AATATAATCA AAATGACACA ACCTATCGTG CAATGATCGG CTTAGAAGGC
AATATTAACG ATAACTGGAC GTGGAGTGCT AACTACATTT ATGGTCAAAA TAATCAAGAT
GTACTAACAA CTGGTCTTTT AAACTTAACG CGTATTAATC AAGCACTTAG CGATAACTGC
GACGCAAGCA ATGGTTGTGT AGCATTAAAT CTATTTGGTG GACCAGGCAC CGTGACGCAA
GATATGGTTG ATTACATTAC TTTTGATAGT GTTAGCCGTT CTGGTTTAAC GATGAAAGAT
TATGCGTTCA ACATCTCTGG TGACTTATTC GATTTGCCAG CAGGTTCTGT TGGTATGGCT
GTTGGTTTAG AGCGCCGTGA AGAATCTGGT TTTGATGTTC CAGATCCACT AACTGTTACA
GGTGAGTCGT CAGGTAACCA ACGTGACGCA ACTGCGGGTG GTTTCCGTTT AGATGAAGCG
TATGTTGAGT TATCAGTCCC TGTGTTAGAA AGTTTATTAA TTACGCCTGC AATACGTGTA
TCTGACCATG ATGCGTATGG TAACAATACT ACTGGGAAAG TAGGTGTTGA ATATCGTCCA
ATGGACGATA TGTTGCTTCG TGGTACCTGG GCTCAGGGCT ATCGTGCACC ATCTATTTCA
GATCTTTATG CAGGTAATGC AGACTCTTAT CCAACATGGA CAGATCCATG TAATACTCCC
TCAAGTGGAA CGATTGACCT AGTACAAAAC CCAGGCTGTG CGGGTGTACC TGATGGCTAT
AAACAAGCAA ATACGCAGAT TCGAATTTCT CAGGTTTCGT CACCTGATCT GAAACCTGAA
ACTTCAGAAT CTTATACATA TGGCGCAGTG TATAATCCAT CATGGCTTGA AGGTGCAGAG
CTAACTCTTG ATTACTATAA TATTAAGGTA AAAGATGCGA TTGGTCGTTA TGGACATACA
ACGATTGCAA GAGAGTGTGC TAAAGGTACT AATCCTGATT CATGTAATTA TATTGACCGT
GATAGCTTAG GTAACATTAC TGACCTGCGT AACTTCCTGC AAAATGCCGG TGAATATAAT
GTTGAAGGAG TTGACTTCTT TACTGCTTAT CGTTTCCCTG AAACCTCATT TGGTTCATTT
AAAGCATCTC TGGATGTAGC TTATGTTATT TCAAATGAAT TTAATGGTAC TGATCGTGTA
GGAGTTCAAA CTGGTGATGG CGGTTTCCCT GAGTTTAAGG GCAACTTAAT GGTTGATTGG
TCGATGGGTG ATTGGGATGC GCATTGGAAA GTGCGTTATG TTGGCCCATT GAATAATGAT
TATTATACAG GTTTAACGCC TGATGATATC GATTATTATA ACGACCTTAA AGATTCTGGC
TATAGAGAGA CGATGGATGC TTATATGGTC CATAACGTAT CAGTTGGTTA CAATATTGAT
GGCTACAATA CCAAAATTTC TTTAGGTATT AATAACCTAT TCGCTAAAAA ACCACAGGCT
GAAGGTCCAA CTAACAACGA AGCCATTTCA ACGAATAACT TCTCTGTTAC TGAATATGAT
GTAAATATGG ATCGTTTCAT CTACTTGCGC GCTACTACTA AGTTCTAA
 
Protein sequence
MYKNNFLANS VRFALIGGVT VAALNAPVAV AADDGAKKVE RIEVTGSRIK RTDMEAASPV 
LVMNREELEA TGMISIGDIL QTIPAAGSAL NTSFNNGGDG STNMDLRNLG AQRLLVLVNG
KRWISSLGST VDLNTIPTSA IERIEVLKDG ASAVYGSDAI AGVINIITRK NFEGVEVSVY
GGQNAKYDDG RQYTADITFG SVSEKGGLLF NMSHVTQQPI WAGDRDISAT GYSSTADNTR
IRVKGSQMNQ ANQDALAAVG SPNSSGIYDF MAKEGTGVNV GVDQLRPRTG SDVYNYAPDN
YLSTPQNRNS FYVQGFYDIS DNLRVVSDFM MTNRKSSQEL APMPLTLGAS FGAAASRVDI
GANNIYNPFG ETLYGDSARA AANGQAGYVP YALQRRMIEA GSRQYNQNDT TYRAMIGLEG
NINDNWTWSA NYIYGQNNQD VLTTGLLNLT RINQALSDNC DASNGCVALN LFGGPGTVTQ
DMVDYITFDS VSRSGLTMKD YAFNISGDLF DLPAGSVGMA VGLERREESG FDVPDPLTVT
GESSGNQRDA TAGGFRLDEA YVELSVPVLE SLLITPAIRV SDHDAYGNNT TGKVGVEYRP
MDDMLLRGTW AQGYRAPSIS DLYAGNADSY PTWTDPCNTP SSGTIDLVQN PGCAGVPDGY
KQANTQIRIS QVSSPDLKPE TSESYTYGAV YNPSWLEGAE LTLDYYNIKV KDAIGRYGHT
TIARECAKGT NPDSCNYIDR DSLGNITDLR NFLQNAGEYN VEGVDFFTAY RFPETSFGSF
KASLDVAYVI SNEFNGTDRV GVQTGDGGFP EFKGNLMVDW SMGDWDAHWK VRYVGPLNND
YYTGLTPDDI DYYNDLKDSG YRETMDAYMV HNVSVGYNID GYNTKISLGI NNLFAKKPQA
EGPTNNEAIS TNNFSVTEYD VNMDRFIYLR ATTKF