| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1381 |
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| Symbol | |
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| ID | 5372569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1663323 |
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| End bp | 1665542 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829580 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001365594 |
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| Protein GI | 152999913 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTGCC TGCCTAAATT TGGGAAATGG AAAGCGAATA GAAATCTGTC GCTGATGGGA
TTATGTTCGT TGTCCTCAAT GCCGTTGTAC GCAAATGAGG TATTGGGCGA GCCTAAGGTT
GAGCCGATTG AAATCCTGCA GGTTCATGGG CAGCAATATC GTAGGGCCAT CACAGTCGCT
AAACCTGGTG AAGCGATTAT TTCCATGGAA CAAATCGAGG AGATGCAGGC GACGACCTTC
GCCGAAGTGA TTGATGATAT GGCGGGAGCG CATATCGATG GTGGCACCCG CAGCGGCGGT
GAGCGGATTA ATATCTGGGG CTTTGGCGAG ACCGAAGATT TTAACGTTTA TGTGGATAAT
GCTCCGGTGG GATTTGAGCA GTATCGCTAT GGCTCATTTT TCCTCGATCC TGATCTCATC
AAACGAGTGG AAGTGATTAA AGGCGCCCAT GATGTGCGCT CGGGCAATGG CGGTTTTGGT
GGGGCCATGT ATGTGGTCAC TAAATCGGCC GATGATTTTC TTAAATACGA TCAAGCGGTT
GGCGCGCGAG TCAAAACCAG CTACGCCAGT AATAATGACG CTATGGGTTA TACGGGAACT
GTCTATGGCC GGGTGAATCC GCATTTATCG GGGTTGTTGC ACCTTACACG CCGTGATGCG
GGGGATGTGA CTTTAGCCAA TGGCGATGAG TTTGAATATT CGGGCTATGA GCAAGATAAC
TATCTAGGCA AGATTGATTA TGAGCAGGGC GATCACCAAC TGGCCTTGAG CGTGACCCAT
TATCTCGATG AGGGCCGCAA ACCTTGGGCT AACCGCCGTG GCCCCATGCC TGCCATCTCA
GACTACAACA TCAAAAAGTA CGGCTCCTAC GAGCAGGCGC TGTATGCCAC AACCGCCTAT
AACACCTATG AAGACAACAC TTGGTCTGCC AATTATCGTT ATTCGCCGAG CAATCCGCTG
ATTGATACCC AAGTGGTGAT CTCCCATTCG GCGAATGCGC GCCACTGGGT AAGACCCGAT
ATTGCGTGGG AGAAAATGAC GGTTTCCGTA GGCAACTTCG GCCACGAATC TTGGCTAGAT
TACAAACGTG ATTATATTGA CATCAACAAC TTGAGTTTGA TTGGCGATCA CGAGATCACC
ACAGGATTGC AGTACCGCAG TCTCGACCGT ACTTCGCTTG TGTTTAACAA GAGTTATGAG
AAGAATCCTG AGAAAAACTT TGGCTGGTAC ACACCTTATT ATCAGCCTGA AGGTCGCCAA
GACACCTATG CCGTGTATGT TCGCGATGCG ATTCATCTCA CCAACGACTT AACCGTCACT
CCCTCGCTGC GATATGACTT TATCTACAGC ATAGGTCGGC CAAATATTGC GCCAGATTAT
AACGACATCA GCGCGGGGCA CGATTATAGC TCGACTCACC ACTCGGGGTT CTCACCCAGA
TTAGGCATAG ATTACCAACT GACAAACTAC GCTCGGTTAA ACTTTGATTA CGCCTATAGT
CTGCAAGCCC CTGTGGTGGA TGAGATTTAT GCCGTGCAAT ACGCGAAAGC CAGCATTACC
GGCACGAGTC GCGACATCGA TGTCGAACGC TTACATGCCT TCAAGTTAGG CTTGATGACA
CAGCACCAGC ATCTGCTTGC CAATGATGAT GCGCTGACGA CGCAGCTTAC TCTGTTTGCC
AACCTAGGCC GCGATGATAT CGCCCAGCGC CGTGGGGCTA AGTCTGATAA AACCCAGTTA
ATTCAAAGCG GTTATACCAA TCTTGATGGT TACCATATTT ACGGTGCCGA TTTTGAAGCC
CAATATCGCT ATCAAGACGT GTTCAGTGAT CTGGCGGTTT CATGGCTGCA AGGTCAGCAC
AATGGGTCAC TCAGAGACAG CCAAGATGAC GACGAGTATT TAGCCAACAT GGCACCGCTC
GATATTCGTC TGCGTTTAGG CATGTATATT ACCGATGATA TTTCAGTGGC TTGGCAGGGT
GCTTGGTATG ATGCGCAAAC TAATGTTCCC CACGGCGATA TCTTTAATGC CGAGTCGCCG
AGCGAAAATT ACTTCCTGCA GAACCTGTAC CTCGCCTATG AGCCCCAAGC CAGTTTAAAG
GGATTAAGCG TGCGTTTGAT GGTGAAAAAC CTCACCAATC TGCAAGTGGT GCCGTTTCTC
TCCGATGGGA TCCCAGCTTC TGGGCGCGAT GTTCGCTTGA GTTTAGGCTA TGAATTTTAA
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| Protein sequence | MGCLPKFGKW KANRNLSLMG LCSLSSMPLY ANEVLGEPKV EPIEILQVHG QQYRRAITVA
KPGEAIISME QIEEMQATTF AEVIDDMAGA HIDGGTRSGG ERINIWGFGE TEDFNVYVDN
APVGFEQYRY GSFFLDPDLI KRVEVIKGAH DVRSGNGGFG GAMYVVTKSA DDFLKYDQAV
GARVKTSYAS NNDAMGYTGT VYGRVNPHLS GLLHLTRRDA GDVTLANGDE FEYSGYEQDN
YLGKIDYEQG DHQLALSVTH YLDEGRKPWA NRRGPMPAIS DYNIKKYGSY EQALYATTAY
NTYEDNTWSA NYRYSPSNPL IDTQVVISHS ANARHWVRPD IAWEKMTVSV GNFGHESWLD
YKRDYIDINN LSLIGDHEIT TGLQYRSLDR TSLVFNKSYE KNPEKNFGWY TPYYQPEGRQ
DTYAVYVRDA IHLTNDLTVT PSLRYDFIYS IGRPNIAPDY NDISAGHDYS STHHSGFSPR
LGIDYQLTNY ARLNFDYAYS LQAPVVDEIY AVQYAKASIT GTSRDIDVER LHAFKLGLMT
QHQHLLANDD ALTTQLTLFA NLGRDDIAQR RGAKSDKTQL IQSGYTNLDG YHIYGADFEA
QYRYQDVFSD LAVSWLQGQH NGSLRDSQDD DEYLANMAPL DIRLRLGMYI TDDISVAWQG
AWYDAQTNVP HGDIFNAESP SENYFLQNLY LAYEPQASLK GLSVRLMVKN LTNLQVVPFL
SDGIPASGRD VRLSLGYEF
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