Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1001 |
Symbol | |
ID | 5371472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1194908 |
End bp | 1196416 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640829194 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001365216 |
Protein GI | 152999535 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACTA TCCTCATCGT CGACGATAAT CACGCCATCT GCCAAGCCCT AGGTTTGATG CTAGAGCTTA ATGATTATCG GGTGCTGACT TGCCATAGTC CGGAGGACGC CCTTGGGTTA TTGGCGACGC AAGATGTGGA TTTAGTGATC CAAGATATGA ACTTTACCCG AGATACCACC TCGGGCGAGG AAGGTAAGCA GCTGTTTTAC GCCCTGCGTG AACGCCAAGG CGATCTGCCG ATTATTTTGA TGACGGCGTG GACTCAACTC GAAACCGCCG TTGAATTAGT CAAAGCGGGC GCGGCCGATT ACATGGGTAA ACCTTGGAAT GACGCTAAGG TACTCAATAG CATTACCAAT TTGATTGCGC TTTATAAACT CTCCCGTGCT AACCATCGTC TCGAGCGGGT GAATCATCAA CGCCAAGTGG CGATCGCCGA TGCGGACCTC TGTGGGATTG TCTTTGGTAG CGGCGCGATG CAGCGTTGCA TTGATTTAGC CTTGCAACTG GCACGCTCCG ATGTGTCGGT CCTCATCACT GGCCCTAATG GTGCGGGTAA AGACAAGCTT GCCGATATTC TCCATGCTAA TTCTCCCTTA AAAAACAAGC CTTTTATCAA GGTCAATGTC GGCGCTTTGC CGATGGATTT ATTAGAGGCA GAGTTGTTTG GTGCCGAGGC GGGTGCTTTT ACGGGCGCAA CTAAAGCGCG TATTGGCCGC TTTGAAGCGG CCGACGGCGG CACACTGTTT TTAGATGAAA TCGGTAACTT GCCCTTATCT GGCCAAGTAA AACTGCTGCG CGTGCTGCAA ACCGGTGAAT TTGAACGCTT AGGTAGCCAT AAAACCCAAA AAGTGAAAGT GCGGGTGATC AGTGCGACCA ATGCGGATCT GGCCCAAGAT ATTGCCGAAG GGCGTTTTCG CGAGGATTTG TTTTACCGCT TAAATGTGAT TGAACTGGCG CTATCGCCGC TGAATCAACG CACCGATGAT ATTTTGCCTT TAGTGCAGCA TTTTATTGGC AGCGATTTTA GCTTGAGTAA ACCGGCATTG CAGGCGTTAT TGCACCATCG CTGGCCGGGA AATGTACGCG AGCTTGAGAA TGCCTGTAAG CGAGCGGTAT TGTTGGCGCA AAGTCATGTG TTGACCGAAG CTGACTTTGG TTTAGCACCT GTCGTGAGTG TCGTAAGAGC TACTTCCCAT ATTTCGGCAG CTTCTGAGCC TCGACGCTTA GATCAGCGAC AGTCTGATCC GCGCATCTGT GGACAGCGAC AATTTGATCC TCAGCCCGTT TATGTGCCAA GTTCTATTCC CACTCATGCC ACTTTTTCTG ATGGCTCTGA ACGCGGTCAA GCGCCGTCTG CCAATGAGGC GATAGAAGTG AGTCGAGAAG ATATCGAAGC GGCGCTAAAA CAGCACCATG GTGTGATTGC TAGGGTCGCC AAAGCGCTTG GACTCAGTCG TCAGGCGTTG TATCGGCGCA TGGATAAGTT TGGTTTAGAT AAGTCATAG
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Protein sequence | MDTILIVDDN HAICQALGLM LELNDYRVLT CHSPEDALGL LATQDVDLVI QDMNFTRDTT SGEEGKQLFY ALRERQGDLP IILMTAWTQL ETAVELVKAG AADYMGKPWN DAKVLNSITN LIALYKLSRA NHRLERVNHQ RQVAIADADL CGIVFGSGAM QRCIDLALQL ARSDVSVLIT GPNGAGKDKL ADILHANSPL KNKPFIKVNV GALPMDLLEA ELFGAEAGAF TGATKARIGR FEAADGGTLF LDEIGNLPLS GQVKLLRVLQ TGEFERLGSH KTQKVKVRVI SATNADLAQD IAEGRFREDL FYRLNVIELA LSPLNQRTDD ILPLVQHFIG SDFSLSKPAL QALLHHRWPG NVRELENACK RAVLLAQSHV LTEADFGLAP VVSVVRATSH ISAASEPRRL DQRQSDPRIC GQRQFDPQPV YVPSSIPTHA TFSDGSERGQ APSANEAIEV SREDIEAALK QHHGVIARVA KALGLSRQAL YRRMDKFGLD KS
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