| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1004 |
|---|
| Symbol | |
|---|
| ID | 5334818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1273876 |
|---|
| End bp | 1274706 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001360756 |
|---|
| Protein GI | 152964972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.118299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00158374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCG CCACGCCGCC CCGCCCCGCC CGCCCGACCG CCCTGGTGAC GGGCGCCACC
GCGGGGCTGG GGGCGGGCTT CGCCCGGTCG CTGGCCCGGC GCGGGCACGA CCTGGTGATC
GTCGCGCGCG ACGCCGAGCG GCTGGACTCC ACGGCCGCGG CGCTGCGCGC CGAGCACGGG
GTCGGCGTCG AGGTCCTCGC CGCGGACCTG TCGGTGCGCG CCGACCTGGA CCGGGTCGCG
CAGCGGGTGG GCAGCGTCGA GGCTCCCGTC GACGTGCTCG TCAACAACGC CGGGTTCGGC
CTCAAGCAGC GCTTCTTCGA CGGGGACCCG GCCGACCACG AGCGGATGTT CGACGTGCTG
TGCCGGGCGG TGATGGTCCT GTCCCGGGCC GCGGCCGGGG CGATGGTGCC GCGGGGGCGG
GGACGGGTCC TCAACGTCGG CTCGGTGGCC GGGCTGGTGC CCGGCGGGGG CCACTACTCG
GCGGCCAAGG CCTACGTGAT CGTGCTGACC GAGACCCTGG CCGGGGAGCT GCGCGGGACC
GGCGTCACCG CGACGGTGGT CGAGCCCGGC TACGTGCGCA CCGAGTTCCA CGCCCGCTCG
GGGATGCGCT CGGGGGGCAG CTCCAGCCTG TCGAACCGGA TCTGGCTGGA CATCGACGAG
GTGGTGGACG CGGCGCTGGA CGACACCTTC GCGGGCCGGG TGGTGAGCGT GCCGACGCGG
CGGTGGAAGG CGGTCTCGAC CCTGCTGGAC GTCGCCCCGC GCCGGCTGGT CAGCACGGTC
TGGAACGCGA TGCCGTCCGG CGCGCGGCGC CGGCACCCGA CGCAGCGGTG A
|
|---|
| Protein sequence | MTSATPPRPA RPTALVTGAT AGLGAGFARS LARRGHDLVI VARDAERLDS TAAALRAEHG
VGVEVLAADL SVRADLDRVA QRVGSVEAPV DVLVNNAGFG LKQRFFDGDP ADHERMFDVL
CRAVMVLSRA AAGAMVPRGR GRVLNVGSVA GLVPGGGHYS AAKAYVIVLT ETLAGELRGT
GVTATVVEPG YVRTEFHARS GMRSGGSSSL SNRIWLDIDE VVDAALDDTF AGRVVSVPTR
RWKAVSTLLD VAPRRLVSTV WNAMPSGARR RHPTQR
|
|---|
| |