Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0779 |
Symbol | |
ID | 5335370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 1502807 |
End bp | 1503667 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001360531 |
Protein GI | 152964747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00749167 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00042824 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTGTCACA TCGTGCCAAG TGGGCGCGTA CCGACGCCCT CCCCCGCACG ACAGGAGCTC ACCGTGGACG TCACCGGTTC CACCGCACTC ATCACCGGCG CCTCGGGCGG CATCGGCGCC GGCATCGCCC GGGCCCTGGC CGCCCGCGGC GCCGACCTCG TGCTCGTCGC CCGCAGCGCC GACAAGCTGG AGGCGCTGGC GGCCGACCTC CGCGCCCGGC ACGGCCGCGA CGTCCTCGTC GTGCCCCTCG ACCTGTCCAC CCCCGGCGCC GGGGCCCGCG TGCAGGAGGC GCTGAGCGGG CGGACCGTCG ACGTGCTGGT CAACAACGCC GGGTTCGGGG TCACCGGCCG CCTCGCCGAG ACCGAGGACC CCGACCGGCT GAGCGCCATG ATCACCCTGA ACTGCACGAC GCTCACCGAC CTCACCGCCC GCTTCCTGCC CGCGATGGTC CAGCGGCGCC GCGGGGCGGT GGTCAACATC GCCAGCATGG CCGCCTACCT GCCCGCCCCC GGCTTCGCCG CGTACGCGGC GACGAAGGCG TTCGTGCTCT CGCTCTCGCA GGCCCTGTGG GCCGAGACCC GCGGCACCGG GGTCCGGGTC GCGGCCCTGT CCCCGACGGT CACCGACACC GGCTTCTTCG ACGTCGCCGG GGAGAACGCG AGCGGGGGGA TGCGCCGGCG CAGCGTCGAC CAGGTGGTCG CCACCTTCCT CGACACCCTC GACGGCGACC GCCCCGTCGT CGTCGACGGC CGGCGCAACG AGGTCCTCGC CGCCGCCGCC CACCTCGTCC CGCGCGGGCC GCTGCTGCGG CTGGTGGGGC CCCGCTTCGC GGACCGCGTC GCCACCGCCC CGGCCGGCTG A
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Protein sequence | MCHIVPSGRV PTPSPARQEL TVDVTGSTAL ITGASGGIGA GIARALAARG ADLVLVARSA DKLEALAADL RARHGRDVLV VPLDLSTPGA GARVQEALSG RTVDVLVNNA GFGVTGRLAE TEDPDRLSAM ITLNCTTLTD LTARFLPAMV QRRRGAVVNI ASMAAYLPAP GFAAYAATKA FVLSLSQALW AETRGTGVRV AALSPTVTDT GFFDVAGENA SGGMRRRSVD QVVATFLDTL DGDRPVVVDG RRNEVLAAAA HLVPRGPLLR LVGPRFADRV ATAPAG
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