Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0239 |
Symbol | |
ID | 5335895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 2077516 |
End bp | 2078448 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | periplasmic solute binding protein |
Protein accession | YP_001359993 |
Protein GI | 152964209 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.527409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00481833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTCGC GCCGCACGCC CCTCGCCCTC GCCGCCGCCC TCACCGCCTC CCTGGCCCTG GCCGCCTGCG GCGGCGGCGA GAGCACCCCC GCGTCCTCGG CGTCCTCCGC GTCCGCCTCC GACGACGGCC TCAGCGTCGT GACCTCCACC AACGTCTACG GCTCCGTCGT GGAAGCCGTC GCCGGCGACG CCGCGACGGT CACCTCGATC ATCGACGACC CCAGCGCCGA CCCGCACAGC TACGAGGCCA GTACCCGCAC CCAGCTGGAG CTGTCGAAGG CGGACGTCGT CGTCGAGAAC GGCGGCGGCT ACGACGACTT CGTCGACACC ATGCTCGACG CGGCCGGCTC GGGGGCCGTC GTGCTGAACG CCGTCGAGCT CTCCGGGAAG ACCGCCGCCG CGGGCGAGGA GCTCAACGAG CACGTCTGGT ACGACGTCGA GACCGTCCGC AAGGTCGCGC AGGCCGTCGA GGAGGAGCTC GCGAAGGCCT CCCCCGACGA CGCCGCCACC TTCGAGGCCA ACCTGGCGAC CTTCGAGGCG GGCCTGGACA CCCTCCAGCA GAAGATCACC GCGGACGCCG CGACGACCCA GGGCCAGCCG GTCGCGATCA CCGAGCCCGT CCCCGGCTAC CTGCTCGAGG CCCTGGGCAC CGTGAACGCG ACGCCGGAGG AGTTCTCCGA GGCCATCGAG GAGGAGACCG ACGTCCCCGT CGACGCCCTC CAGGAGACAC TGGCCCTGTT CACGCAGAAG CAGGTGCGCG CCCTGGTCCA CAACGAGCAG ACCACCGGCC CGCAGACCGA GCAGGTCCTG CAGGCTGCGC AGGACAACGG CATCGCGGTG GTGCCGGTGA CCGAGACGCT CCCCGACGGC GAGGACTACA CGACGTGGAT GACCGGGAAC GTGGACGCGA TCGCGGCGGC GCTGGCCCGG TGA
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Protein sequence | MPSRRTPLAL AAALTASLAL AACGGGESTP ASSASSASAS DDGLSVVTST NVYGSVVEAV AGDAATVTSI IDDPSADPHS YEASTRTQLE LSKADVVVEN GGGYDDFVDT MLDAAGSGAV VLNAVELSGK TAAAGEELNE HVWYDVETVR KVAQAVEEEL AKASPDDAAT FEANLATFEA GLDTLQQKIT ADAATTQGQP VAITEPVPGY LLEALGTVNA TPEEFSEAIE EETDVPVDAL QETLALFTQK QVRALVHNEQ TTGPQTEQVL QAAQDNGIAV VPVTETLPDG EDYTTWMTGN VDAIAAALAR
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