Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5008 |
Symbol | |
ID | 5356689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5163533 |
End bp | 5164531 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640814054 |
Product | putative transcriptional regulator |
Protein accession | YP_001350344 |
Protein GI | 152985162 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.250322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCTC AATCCGCCCC GGTGCTGAAA CATGTCGGCA TCGTCGCCAT CGACGGCGTC TTCGCCTCGA CCCTGATGCA GGCCAAGGAC TTCTTCCACA TGGCCAGCCT GCGCCACGGC AAGCAGCAGG GCCTCGGCCT GCAGCCGGCC TTCCGTACGC GCATCCTCAG CCCCGACGGC CAGCCGGTAC GCAGCTTCAG CGGCGACAGC ATCGCCGTCG ACGGCCCCCT CGCCGCCTGC GATATCGTGG TCCTGCCAGC CTTCTGGGGC GACTTCGACG CCCTCGAGCG GCGCTATCCG CAGATCGTCC CCTGGCTGCG CCGCAGCCAC GCCGAGGGCA CCGCGCTATG CGGCGAGGCC ACCGGGGTCT TCTGGCTGGC CCGGGCGGGG CTGCTGGACG GCAAGGAAGC GACCACCTAC TGGCGTTTCT ACCGGGAATT CGCCGAGCGC TTTCCGAATG TGCTGCTCAA CCAGGAAAAA CACCTCACCG ACGCCGACGA CCTGTTCTGC GCCAGCGGCG TCACCTCCGC CTGCGACCTG TACATCTACC TGATCGAACG CTTCTGCGGC GGTCCGGTGG CCCAGGCGGT GGCCCGCGAT ACCCTCTACG AGGTGCAGCG CAGCTACACC CCGGGACGCA TCGGCTTCGG CGGGCAGAAA CTGCACCACG ACCCGACGAT CCTGCAGATC CAGCAATGGC TGGAAGACCA CTTCGCCGAC AAGTTCCGTT TCGAGGATGT CGCCCGCGAC CACGGCATGA GCATCCGCAA CTTCATGCGG CGCTTCCAGG CGGCCACCGG CGACAAGCCA CTGCACTACC TGCAGCGCCT GCGCATCGAG ACCGCCAAGG GCCTGTTGTC GAGTACCCGC AAGAGCATCA AGACGATCAG CTACGAAGTC GGCTACGACG ACGCCAGCTT CTTCGCCCGC CTGTTTCGCC AGCACACGGA GCTCTCCCCC CACCATTACC GCCGCCAGTT CCTGCAGAAG GAAAGCTGA
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Protein sequence | MRAQSAPVLK HVGIVAIDGV FASTLMQAKD FFHMASLRHG KQQGLGLQPA FRTRILSPDG QPVRSFSGDS IAVDGPLAAC DIVVLPAFWG DFDALERRYP QIVPWLRRSH AEGTALCGEA TGVFWLARAG LLDGKEATTY WRFYREFAER FPNVLLNQEK HLTDADDLFC ASGVTSACDL YIYLIERFCG GPVAQAVARD TLYEVQRSYT PGRIGFGGQK LHHDPTILQI QQWLEDHFAD KFRFEDVARD HGMSIRNFMR RFQAATGDKP LHYLQRLRIE TAKGLLSSTR KSIKTISYEV GYDDASFFAR LFRQHTELSP HHYRRQFLQK ES
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