| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1915 |
|---|
| Symbol | |
|---|
| ID | 5353757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1949510 |
|---|
| End bp | 1950655 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640810968 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001347296 |
|---|
| Protein GI | 152984282 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTC AGCCGCAACC CGGCCACGTG AGCCTGGATA GTTCCACCCA GCCCGCCCGC
GTCAGAGCCA TAGGTGATTG GACGCTCGCC CACTACACGG CCCTGGAGCG CGAGGTGACG
CGCCTGCGCA GCCAGGTGGC GGGCGACGCC AGCTTCGACC TCAGCCAGCT CGGCGCCCTG
GATACCGCCG GCGCCGCGCT GCTCGCCGAG CTGCTCGGCG CCGAACGCCT GGCCGACCTC
GCCGAGCTGG AGCCTGGCCT GCCGCGCGAG CGCCAGGCCC TGCTGAAGAC CGTCGGCCAC
GCCCTGCACG ATTTCTGCGA ACCGGAAAAA CCCAAGCCGC CGACCACCGC CATCGAACTG
CTGGCGCGCA TCGGCTGTGC CATGGAGACC TTCTGGCTGC ACCTCAAGGC GCTCCTCGGC
TTCATCGGCC TGACCCTGGA AACCCTGCTC CGCAGCCTGG TCCGCCCGGC CAGCTGGCGG
GTCACGCCGC TGGTGGCGAA CATCGAGAAG AGCGGCCTGG ACGCGGTGCC GATCATCGCC
CTGCTGACCT TCCTGGTCGG CGCGGTGATC GCCTTCCTCG GCGCCACGGT GCTGGCCAAC
TTCGGTGCGA CCATCTACAC GGTCAACCTG GTGGTGTTCT CCTTCCTCCG CGAATTCGCC
GTGCTGCTCA CCGCGATCCT CATGGCCGGC CGCACCGCCA GCGCCTTCAC CGCGCAGATC
GGTTCGATGA AGGCCAACGA GGAGATCGAC GCGATCCGCG CCCTCGGCCT CAACCCCATC
GAACTGCTGG TGCTGCCGCG GGTGCTGGCG CTGCTGGTGT CGCTGCCGAT GCTGACCTTC
GTCGGCATGC TCTGCGGCAT CGTCGGCGGC ATGACGGTCT GCGCCTGGTC CCTGGACATC
CCGCCGGCGA TGTTCCTGTC GATCATGGAG GACGGCATCG GCGTCCAGCA TTTCCTGGTC
GGCATCAGCA AGGCCCCGCT GTTCGCCTTC CTGATCGCCG TGATCGGCTG CCTGGAAGGC
TTCAAGGTCA GCGGCAGCGC GCAGTCGGTG GGCGAGCACA CGACCACCAG CGTGGTCCAC
TCGATCTTCG TGGTGATCCT GCTCGACGCC CTCGCCGCGC TGTTCTTCAT GGAGATGGGC
TGGTGA
|
|---|
| Protein sequence | MTTQPQPGHV SLDSSTQPAR VRAIGDWTLA HYTALEREVT RLRSQVAGDA SFDLSQLGAL
DTAGAALLAE LLGAERLADL AELEPGLPRE RQALLKTVGH ALHDFCEPEK PKPPTTAIEL
LARIGCAMET FWLHLKALLG FIGLTLETLL RSLVRPASWR VTPLVANIEK SGLDAVPIIA
LLTFLVGAVI AFLGATVLAN FGATIYTVNL VVFSFLREFA VLLTAILMAG RTASAFTAQI
GSMKANEEID AIRALGLNPI ELLVLPRVLA LLVSLPMLTF VGMLCGIVGG MTVCAWSLDI
PPAMFLSIME DGIGVQHFLV GISKAPLFAF LIAVIGCLEG FKVSGSAQSV GEHTTTSVVH
SIFVVILLDA LAALFFMEMG W
|
|---|
| |