Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1879 |
Symbol | rluA |
ID | 5358590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1917665 |
End bp | 1918300 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640810932 |
Product | pseudouridine synthase RluA |
Protein accession | YP_001347260 |
Protein GI | 152987872 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGT CCCAGATCCG CATCGTTCAC CAGGATGACG CCCTGCTGGT GGTCGACAAA CCCACCCTGC TGCTGTCGGT ACCCGGCCGC GCCGACGACA ACAAGGATTG CCTGGTTACC CGCCTGCAGG AAAACGGCTA CCCCGAGGCC CGCATCGTGC ATCGCCTGGA CTGGGAAACC TCCGGCCTGA TGGTGCTCGC CCGTGACGCC GACAGCCACC GCGAGCTGTC CCGCCAGTTC CACGACCGCG AGACCGAGAA AGCCTATACC GCCCTTTGCT GGGGCCTGCC GGAACTGGAC AGCGGGCGCA TCGAACTGCC GCTGCGCTAC GACCCGCCGA CCAAGCCGCG CCACGTGGTG GACTTCGAGC ACGGCCGCCA CGCCCTGACC TTCTGGCGCG TGCTGGAGCG CCACGAGCGC TGGAGCCGGG TCGAGCTGAC GCCGATCACC GGCCGCTCTC ACCAGTTGCG CGTGCACATG CTCTCCATCG GCCATCCGCT GCTCGGCGAC CGCCTCTACG CCAACCCCGA GGCCCTGGCC GCCCACGACC GCCTGTGCCT GCACGCCAGC CTGCTGTGCC TGACCCATCC GCGGAGCGGC GAACGCCTGC GCTTCGAGTC AGCGGCACCG TTCTGA
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Protein sequence | MPLSQIRIVH QDDALLVVDK PTLLLSVPGR ADDNKDCLVT RLQENGYPEA RIVHRLDWET SGLMVLARDA DSHRELSRQF HDRETEKAYT ALCWGLPELD SGRIELPLRY DPPTKPRHVV DFEHGRHALT FWRVLERHER WSRVELTPIT GRSHQLRVHM LSIGHPLLGD RLYANPEALA AHDRLCLHAS LLCLTHPRSG ERLRFESAAP F
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