Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1835 |
Symbol | |
ID | 5366897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2062996 |
End bp | 2063829 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640804176 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001340694 |
Protein GI | 152995859 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.140482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.818318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCA TTCATAAAGA TTTTAGTATT GCGAATATTC GATCTAAACA ACCTTGGTTT GTATTTTGTT CAGCTGGAGA ATACTCGGTC AAAATCTCAA GTATTCCATT TATTTCTCAT TTTTACAGCT TTGAAGCTAA AACATCTATC GACGTAATCA ATGCCATTCC TGATGGTTGC ATTGATATTT TATTTGATTG CGATAGTTCA AAGCCAACAG CTATTGTCTG CGGCACAACA CTAGAAGCAC AAAGTGTCGA TTTTATTAAT CAGCATCGCT ACTTCGGCGT CAGAATGTCT CCAGGCTCCA TCCCTAGTTT TCTTGACATT TCTGCTTCAG AGCTAGTAAA CCAAAGACCC AATTTTAATG ATACTACACA TAAAATAAGT GATTTATTCG AAAAAATTGT CAGTCAGAAT TCCTTTACCA ATCAGGTAAG CATTTTTTCA GATTTTTTAA TTAAGTTTGG AATAAGAAAT CATTCGTCTC TTACGCAGCA GGTAATAGCA CACATTTTCC ACTTAAAAGG AAATATTCAA ATACAAAATC TTGAGTCGAT CACTGGCTAC ACTAGCAGAA CCATTCAACG ACAATTTATC AATGACACAG GGATTACACC TAAAGCTTTT TGTCGTATTG TGCGTTGCCA ATTTGCTATT TATAACATCA ACCTAAACAC CAAAATAAAA CCATCGGATA TAGCCTACAA CCTAGGCTTC AATGATCAAT CTCATTTTTC TCGCGAATTT AAATCTCTTA TCAGCACAAC ACCAAACGGT TATATCAATC ATCTAAAAAA CAGCACTTAC TTAGAAAAAA TACATTTCCA TTGA
|
Protein sequence | MNSIHKDFSI ANIRSKQPWF VFCSAGEYSV KISSIPFISH FYSFEAKTSI DVINAIPDGC IDILFDCDSS KPTAIVCGTT LEAQSVDFIN QHRYFGVRMS PGSIPSFLDI SASELVNQRP NFNDTTHKIS DLFEKIVSQN SFTNQVSIFS DFLIKFGIRN HSSLTQQVIA HIFHLKGNIQ IQNLESITGY TSRTIQRQFI NDTGITPKAF CRIVRCQFAI YNINLNTKIK PSDIAYNLGF NDQSHFSREF KSLISTTPNG YINHLKNSTY LEKIHFH
|
| |