Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3278 |
Symbol | |
ID | 5324157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3461244 |
End bp | 3462470 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792226 |
Product | putative ABC transporter solute-binding protein |
Protein accession | YP_001328937 |
Protein GI | 150398470 |
COG category | [R] General function prediction only |
COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGC TGGTCGGAAA AATGATCGCC GCGGCAATGC TGTCGCTTGG CCTCGCCGCG GGGGCCTTCT CCGCGGACCC AGGCAAGTGG AAAGCGGTCG TTGCACAAGC CAGGGGTCAG ACGGTCTATT TCAACGCCTG GGGAGGCGCT GCAAATATCA ACGCCTACAT CGAATGGGCC GGCGACGAGA TGAAGAGCCG TTACGGCGTG ACCGTCGTTC ATGTGAAGCT CGACGACACC GCCAAAGCGG CCGGGACTGT GCTTGCGGAG AAAGCGGCAG GAAAAGACGA GCACGGCGCG GTCGATCTGG TGTGGATCAA CGGCGAGAAT TTCGCCGCCA TGAAGCGTGA AGGGCTGCTT TACGGGCCCG ACTGGGCAAC GAAACTGCCG AACTGGCGCT ATGTCGACAC GGAAAACAAG CCGACGGTGC TGACCGATTT TACCATTCCG ACCGAAGGGC TGGAGAGCCC CTGGGGCGGC GCCAAGCTCG TGTTCTTCTA CGATCAGGCG CGCACCCAGG CGACCGAATT GCCTGATTCC GCGGCGGATC TTCTGAAATG GGCTGAAGCC AATCCAGGGC GCTTCTCCTA CCCGCAACCA CCGGATTTCA CCGGATCTTC CTTCCTGAAG CAGGTGCTGA GCGAAGTCGT CTCGGACAGG AGCAAGCTGC AGACACCCGT TGACGACGCT ACTTTCGATA CGGATGTGGC GCCCTTGTTT GACTATCTCG ACAAGCTCAC GCCGCACTTG TGGCGAAAGG GCAAGGCCTT CCCGCAGAAC TATGCGGACA TGAAGCAGAA GCTCGCCGAC GGCGAGCTCG ACATCATCTT CGCCTTCAAC CCCGCAGAAG CCTCCTCCGC CATCGCCGAT GGCGAGCTGC CGGAAACGGT GCGTTCCTTC GTCTTTTCAG GCGGCACGCT TGGTAACACG CATTTCGTCG CCATTCCCTA CAATGCGACG GCGAAGGCCG GCGCGCTTCT GCTTGCCGAT TTTCTCCTCT CGCCCGAGGC ACAGCTTCGC AAGCAGGACC CGAAGGTCTG GGGGGATCCC ACAGTTCTCT CCCTCTCAAA ACTTCCGGCA GCCGACCGAT CCGCCTTCGA GCGTCTGGAG CTCGGCATTG CAACGCTTCC TCCCGACAAA CTTGGTCCCG CGCTCGACGA ACCGCATCCG GACTGGATGA CACGGATCGA AACCGAGTGG ATCCGGCGCT ATGGCGCGGC CAACTGA
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Protein sequence | MIRLVGKMIA AAMLSLGLAA GAFSADPGKW KAVVAQARGQ TVYFNAWGGA ANINAYIEWA GDEMKSRYGV TVVHVKLDDT AKAAGTVLAE KAAGKDEHGA VDLVWINGEN FAAMKREGLL YGPDWATKLP NWRYVDTENK PTVLTDFTIP TEGLESPWGG AKLVFFYDQA RTQATELPDS AADLLKWAEA NPGRFSYPQP PDFTGSSFLK QVLSEVVSDR SKLQTPVDDA TFDTDVAPLF DYLDKLTPHL WRKGKAFPQN YADMKQKLAD GELDIIFAFN PAEASSAIAD GELPETVRSF VFSGGTLGNT HFVAIPYNAT AKAGALLLAD FLLSPEAQLR KQDPKVWGDP TVLSLSKLPA ADRSAFERLE LGIATLPPDK LGPALDEPHP DWMTRIETEW IRRYGAAN
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