| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3069 |
|---|
| Symbol | |
|---|
| ID | 5323948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3218214 |
|---|
| End bp | 3218717 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640792019 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001328730 |
|---|
| Protein GI | 150398263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTAA GAAAGATCGT AACGGCACTC GCATTCGTAT TGGCTGCATC CGGCGTGGCC
TCCGCTCAAT CTCCGACGCG AATCCAGCAG TTCAACGCCT GGGGCGCCTA TTCCTATCAG
GCAGGCAACG GCAAGGTCTG CTACGTGCTC TCGGTACCGA AGGAAAAGAG CCCGGCCAGT
GTCGATCACG GCGATATCTT CTTCCTGGTT TCGCAGCGTC CGGGACAGAA CATCAGCTAC
GAGCCGCAGG CGATGATGGG TTATCAGCTG CAGGACAATT CCAAGGTCAA CGTGGTGGTC
GACGGTCGCA CCTTCGTCAT GTTCACCAAG GGCAACTCGG CCTGGGTGGA AAACGCCGCA
GAAGAGCCGG CACTGGTGGC CGCGATGAAA TCGGGCAAGG CCATGTCGGT CAATGCGAAG
TCGCGTCGCG GTACCGAAAC CTCCTACTCC TATTCGCTGT CAGGCATATC GGCTGCCCTG
AAGCAGATCG AGGCCTGCAA ATAA
|
|---|
| Protein sequence | MFVRKIVTAL AFVLAASGVA SAQSPTRIQQ FNAWGAYSYQ AGNGKVCYVL SVPKEKSPAS
VDHGDIFFLV SQRPGQNISY EPQAMMGYQL QDNSKVNVVV DGRTFVMFTK GNSAWVENAA
EEPALVAAMK SGKAMSVNAK SRRGTETSYS YSLSGISAAL KQIEACK
|
|---|
| |