| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2858 |
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| Symbol | |
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| ID | 5323728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2985871 |
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| End bp | 2986803 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791803 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001328523 |
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| Protein GI | 150398056 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.427449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAGC AGGATCTGAT GGCAAGGGCC GCATGGCTCT ATCATGTGGA AGGACTGACG
CAGGCCGAGA TCGGCAAGCG CATGAATCTC ACCCGCCGCC GGGTGAACGA GCTTCTCTCA
TCGGCGCTGG AGCAGGGCAT CGTCCGAATC AGTTTCGGCT CACCCCTCAT CGAGAACGCC
GAACTGGAAT CGCAGCTTCG GGATCGGTTC GGACTGGATG ACGCAGTGGT GGTGCCCACC
CCTGCCGATC CGTGCCTTCT ACACTCCGTC ATTGGACGCG GAGCCGCCGC CTATCTCGAT
CGCCTGATCC AGATGCGCAA GCCCGCATCG ATCGGAGTCG GTTGGGGGGC GACGCTGCGG
CAGACGATGC AGCACATGAC GCCTGCCAGT GAACCCCAGA TCGACGTGCG TTCAATGATG
GGCGGCCTGA CGCACGGATC GGAAATCAAC ACCTTCGAAA TCGTCCGCGG GTTTGCGGAA
GTCCTGAAGG CGCAATGCCA CTATTTCGTG GCTCCGATCT ATGCCGAAAC GGCGCAGTCA
CGCGATGCGC TCATAGCGCA GTCGGTATTC CGCAAGACTT TCCGCCAGAT CTGCGAGGTA
GACATTTCCT ATCTGAGCGC CGGTGACGTG TCGCAGCAAT CGCTGCAGGT ACGCTACGGC
CTTCCCGAGG GTGTAGCTGT CAACGACCTC TCGGCCCTCG GTGCGGTCGG CGATCTACTC
GGCCGATATG TCGACATCCA AGGCAGCCCC GTCGATCATC CGCTCAATCG TCAGGTGCTT
TCTCCGGAGT TCGAAGACTA TCGCCGCATT CCCTGCCGCA TCGTCGCCTC AGGCGGTCCG
CACAAGCACG ACATCCTCCT GGCTCTGGCC CGGGCAAAAC TGCCGACGAT CATGATCACC
GATGCCGAGA GCGCCCGCGC AATGCTGCGG TAA
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| Protein sequence | MGQQDLMARA AWLYHVEGLT QAEIGKRMNL TRRRVNELLS SALEQGIVRI SFGSPLIENA
ELESQLRDRF GLDDAVVVPT PADPCLLHSV IGRGAAAYLD RLIQMRKPAS IGVGWGATLR
QTMQHMTPAS EPQIDVRSMM GGLTHGSEIN TFEIVRGFAE VLKAQCHYFV APIYAETAQS
RDALIAQSVF RKTFRQICEV DISYLSAGDV SQQSLQVRYG LPEGVAVNDL SALGAVGDLL
GRYVDIQGSP VDHPLNRQVL SPEFEDYRRI PCRIVASGGP HKHDILLALA RAKLPTIMIT
DAESARAMLR
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