Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2837 |
Symbol | |
ID | 5323707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2961997 |
End bp | 2962785 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640791782 |
Product | response regulator receiver protein |
Protein accession | YP_001328502 |
Protein GI | 150398035 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000311945 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.812847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACGTG CGACCTCGGG GTTGGGCAGT TTCCAAGACA GCAAAAGCGT ATCACCGGAG AAAAGCAAAA TAGTCATGCT CGCAAGGACG GACCTCTTCG CCGAGTGTCT GGCCCAGGCG ATAGGTTCAC GGTTCCAGGA TCAGGACGTG GTGCGCCTTT CGGATGCCGA TAGCCTTCTG GACGGCAATC TCGTGAATGT GTCGCTGGTC ATGCTCTACC GGGTACCGGC CACGACCTTT CCATCCACCA TCAGAATGAT CCATGAGTTT CATCCTAAAG CGGCGGTCGG CTTGCTGGTT GAGAACGCGG AAGGGCTCGA CGCGTCGGTT GCGCACCTGG TCGAAGAGGG GATGATCCAC GGCGTGTTGC CGCTAAATCT CCATCTCGAT GTTTGCCTTA CCGCCATCGA CCTCCTGATG AAGGGCGGCG AGCACTTTCC CGCGGCACTC CTCAGACGGC TTGCGCCGAA GAATCCCGGA GAGCGGGACT TCTCTGGCCC GAACGAAACG GCATCTGAAA ACGGGAATCC GGAGCGCAGC AAAGGGCTTG GCCAAGTCGT GCTCACGACA CGCGAGATCC AGATTCTCGA TCTCATCTGC ATGGGCACGC AGAACAAGAT CATTGCAGAT CGACTCGGCC TGTCCGAAAA TACCGTGAAG GTTCACGTCC GCAACATCTA CAAGAAAATG AACGTTCGCA ATCGAACCGA GGCGGCGTCG CGCTATTTCA GAAGCGATGA AGGCCTAGGC CCTTCTCGCA CGCCGCCGCC GACGCGCTGG CGCAATTGA
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Protein sequence | MLRATSGLGS FQDSKSVSPE KSKIVMLART DLFAECLAQA IGSRFQDQDV VRLSDADSLL DGNLVNVSLV MLYRVPATTF PSTIRMIHEF HPKAAVGLLV ENAEGLDASV AHLVEEGMIH GVLPLNLHLD VCLTAIDLLM KGGEHFPAAL LRRLAPKNPG ERDFSGPNET ASENGNPERS KGLGQVVLTT REIQILDLIC MGTQNKIIAD RLGLSENTVK VHVRNIYKKM NVRNRTEAAS RYFRSDEGLG PSRTPPPTRW RN
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