Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2500 |
Symbol | |
ID | 5323367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2595468 |
End bp | 2596127 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791442 |
Product | hypothetical protein |
Protein accession | YP_001328165 |
Protein GI | 150397698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.121247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCAG GACAGCAGAA CAAGCGCGGC CGTGGGCGGA ATAACAACAA CAGCGGAAAC AACAACAACA ACAATCGCAA GGGATCCAAT CCCTTGACGC GGACCTACGA CAGCTCCGGC CCGGATGTGA AGATTCGTGG TACCGCACAG CATATTGCCG AGAAATATGC GGCTCTTGCT CGCGACGCGC AGAGCTCCGG CGACCGCGTG ATCGCCGAGA ACTACCTGCA GCATGCCGAG CATTACAACC GCATCATCGC GGCTGCGCAG GCTCAGATGC AGGACCGATT CCAGCGCGAC GAGCGCCAGG ACTATCAGGA CCGTGACTCC GGCGATCGTG ACTCTGCCGA CCGCGATCAG GACGATATGG ATCAGGGTTA TGCAGACGAA GCGCCGGCCG CTCCACCAGC AGCAGCGGCT CCCGCCAGCG AACCTCAGCC GGTCATTGAT GGTTCGGGCC CGCAGCCGGT GATCGAGGGC ATGCCTGCCG AAGTGGCAAT GGAAGAGGAA GCCCAGGGCT CTGCCGGTCG GTCGGCTTCC CGCCGGCGCA GTACGAGCCG GCCTCGCCGG CAACCGCGCC GCGCCGCTCA GGACGAGGCG GCCGGCGACG CGCAGCCCGC GACCGACGGC AGTACCCCGG CGCTCGCCAC CTCGGAATAA
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Protein sequence | MRPGQQNKRG RGRNNNNSGN NNNNNRKGSN PLTRTYDSSG PDVKIRGTAQ HIAEKYAALA RDAQSSGDRV IAENYLQHAE HYNRIIAAAQ AQMQDRFQRD ERQDYQDRDS GDRDSADRDQ DDMDQGYADE APAAPPAAAA PASEPQPVID GSGPQPVIEG MPAEVAMEEE AQGSAGRSAS RRRSTSRPRR QPRRAAQDEA AGDAQPATDG STPALATSE
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