Gene Smed_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2500 
Symbol 
ID5323367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2595468 
End bp2596127 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID640791442 
Producthypothetical protein 
Protein accessionYP_001328165 
Protein GI150397698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.121247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCAG GACAGCAGAA CAAGCGCGGC CGTGGGCGGA ATAACAACAA CAGCGGAAAC 
AACAACAACA ACAATCGCAA GGGATCCAAT CCCTTGACGC GGACCTACGA CAGCTCCGGC
CCGGATGTGA AGATTCGTGG TACCGCACAG CATATTGCCG AGAAATATGC GGCTCTTGCT
CGCGACGCGC AGAGCTCCGG CGACCGCGTG ATCGCCGAGA ACTACCTGCA GCATGCCGAG
CATTACAACC GCATCATCGC GGCTGCGCAG GCTCAGATGC AGGACCGATT CCAGCGCGAC
GAGCGCCAGG ACTATCAGGA CCGTGACTCC GGCGATCGTG ACTCTGCCGA CCGCGATCAG
GACGATATGG ATCAGGGTTA TGCAGACGAA GCGCCGGCCG CTCCACCAGC AGCAGCGGCT
CCCGCCAGCG AACCTCAGCC GGTCATTGAT GGTTCGGGCC CGCAGCCGGT GATCGAGGGC
ATGCCTGCCG AAGTGGCAAT GGAAGAGGAA GCCCAGGGCT CTGCCGGTCG GTCGGCTTCC
CGCCGGCGCA GTACGAGCCG GCCTCGCCGG CAACCGCGCC GCGCCGCTCA GGACGAGGCG
GCCGGCGACG CGCAGCCCGC GACCGACGGC AGTACCCCGG CGCTCGCCAC CTCGGAATAA
 
Protein sequence
MRPGQQNKRG RGRNNNNSGN NNNNNRKGSN PLTRTYDSSG PDVKIRGTAQ HIAEKYAALA 
RDAQSSGDRV IAENYLQHAE HYNRIIAAAQ AQMQDRFQRD ERQDYQDRDS GDRDSADRDQ
DDMDQGYADE APAAPPAAAA PASEPQPVID GSGPQPVIEG MPAEVAMEEE AQGSAGRSAS
RRRSTSRPRR QPRRAAQDEA AGDAQPATDG STPALATSE