Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2458 |
Symbol | |
ID | 5323319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2540642 |
End bp | 2541349 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791396 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001328125 |
Protein GI | 150397658 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAC TTGACCGCGG CCCGTCGCTG ACCGATCAGG CAGTGCAGCA AATCCGCGAC CGCATCGTGC GCGGCGAGTT CCAGCTTGGC GAACCGCTCT CGGAAATCGC GCTCGCCACC GAGCTCGGCG TTTCCAAGAC GCCGGTGCGC GAGGCGCTGA TGGTGCTTAA GCGTCAGGGC CTCATCGAAG TGCATCCGCA GCGAGGGTCG TTCGTCTTCG ACATGGATGC GAAACAGGTC CGGAAGCTTT CCGAGCTGCG CGAAGTGCTC GAACTGGCGG CCATGCGGAT GGCACTTGCC AACGACCGGC AGGCACTCGC CCGGCAATGG ACCGATGTTG TCGGGAAGAT GCGCAAGGCG CTCGATGCCG ACGACGCGGA GCTCTACCGC ACGCTTGACG GCGGCTTCCA TATGGTCCTC TTCGAACTTG CCGACAATGC CTACCTTCTG GAAGCCTACG AGTTGATCGC CTTTCGCGTT CAGGCCCTGC GCAACCGACT CTCGCTCGCT CCTTCGCTCA ACGCCTCTTC GTTCGAAGAC CATCTGCGCC TTGCCGAACT GATCGCCGGA GGCAAGGACG GCGACGCAAT CGACCTCATG GGTAGGCACA TCGCCACGAC GCGGGAGCAC TATCTGGCTG CGGCGAAGGC GCGGGACGCC GAAGGGACGG CGCCGACCAA AGGACGGCGA CGCGCGACCC GTCGCTGA
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Protein sequence | MSTLDRGPSL TDQAVQQIRD RIVRGEFQLG EPLSEIALAT ELGVSKTPVR EALMVLKRQG LIEVHPQRGS FVFDMDAKQV RKLSELREVL ELAAMRMALA NDRQALARQW TDVVGKMRKA LDADDAELYR TLDGGFHMVL FELADNAYLL EAYELIAFRV QALRNRLSLA PSLNASSFED HLRLAELIAG GKDGDAIDLM GRHIATTREH YLAAAKARDA EGTAPTKGRR RATRR
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