Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2145 |
Symbol | |
ID | 5323005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2214344 |
End bp | 2215432 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791083 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001327813 |
Protein GI | 150397346 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAG CAAGATCCTC GAACGGACCA ACCCCTGAAT CAAGTCGAGG GCGCGCTTCC GGCGCGCCCC GCGCCCCGCG CCCAGCAACA GCTTGGCTGC CGATACGAAC TGCCGCAAGG CGGCCGACAT CTCAACTGGC AGAAGGACCT CGCACCTTGG TGTCAACGCC CAAGAGAGAA CAGGCGCGCG CCGCTCGAGC GGAAGCCGCC GATCGCGAGC CGCATGGCTG GCTCGGGCTC GTCTTCATCG CGCCCAGCAT GGTTTTCATA GGCGGTCTTT TCGTCATCCC GCTGGTGATG ACGGCTTGGA TGAGTTTCTA TCACTGGCCA CTGCTCGGAC GTAGGAAGTT CATCGGCCTG GACAACTACG CCGAACTGCT TGGTGACACG CAGCTCTGGC AGGCGCTTGG CTTCACGCTG CTCTATACGG TCCTGGTGAC AGCGGCGATC CTGGTCGTCG CCTTTCCGCT GGCGCTGCTC GTAGATCGAC CGCTGCGTAA CACGGGAATC TTCCGGACGA TCTATTTCAT GCCGGTCGTT ATCGGTTTCG GGGCCGCCTC CACATTATGG ATGTGGCTCC TCAATCCGGA CAGCGGCGTC TTCTCCCGCC TGCTTTTGGG CCTGGGCATA GTAGATGCCG CTCCGCGCCC GCTCGAGAGC TTCTGGCCGG CGCTGGCCGT GGTCATCCTG ATGGTCGTCT GGAAAACCGC GGGCTTCACC ATGGTCATCC TGCTCACCGG ACTTCAGAGC ATTCCACAGG AAATCGCTGA AGCTGCGAAG ATCGATGGTG CCAACGCGTT CAGCCGTTTC CGCAGGATTA CGCTGCCCCT GATGCGCAAC GCGCTGTTGC TCGCCCTTGT TCTGAACATC ACCTCTTCGA TGCTTGCATT CGACCAGTTC TTTATCATCA CACAGGGTGG CCCCGAAAAC AGCACGATCT CGGCCGTGTT CTCGATCTAC CTGGCGTCGT TCTCGTCCTA TCGCCTCGGC TACGGCTCGG CTCTCTCCTT TGCCCTGCTC GTCGTCCTCG TCGCGATCAG CTCCATTCAG CTCAGCTTCA TGCGCCAGCG TCCGGAGGAG GGTCGATGA
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Protein sequence | MGSARSSNGP TPESSRGRAS GAPRAPRPAT AWLPIRTAAR RPTSQLAEGP RTLVSTPKRE QARAARAEAA DREPHGWLGL VFIAPSMVFI GGLFVIPLVM TAWMSFYHWP LLGRRKFIGL DNYAELLGDT QLWQALGFTL LYTVLVTAAI LVVAFPLALL VDRPLRNTGI FRTIYFMPVV IGFGAASTLW MWLLNPDSGV FSRLLLGLGI VDAAPRPLES FWPALAVVIL MVVWKTAGFT MVILLTGLQS IPQEIAEAAK IDGANAFSRF RRITLPLMRN ALLLALVLNI TSSMLAFDQF FIITQGGPEN STISAVFSIY LASFSSYRLG YGSALSFALL VVLVAISSIQ LSFMRQRPEE GR
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