Gene Smed_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1956 
Symbol 
ID5322815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2008417 
End bp2009022 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID640790894 
Productmethyltransferase type 12 
Protein accessionYP_001327625 
Protein GI150397158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.177509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0792402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCCAT TCGACAGCGA CCACACGAGC CAGTTCTACC GCGAGAACGC CGCATGCTAT 
GCAAGCCGTC CGCGCCGCGC GCCTGACACC CGGCTGGACA CGTTCCTTTC GCGCTTGAGA
CCCGGCGCAG CCGTGCTCGA ACTCGGCTGT GGAGGCGGCC AGGACAGCGC CTATATGATC
GCAAAGGGTT TCGACGTGAC ACCGACGGAC GGCTCTCCGG AGCTTGCGGC CGAAGCGTCT
CGCCTGCTCG GAAGAAAGAT TGCCGTCCTG CGCTTTGAAG AATTGCGCTG GCGCGACGCC
TTTGACGGCG TTTGGGCAGA GGCATGCCTG CTGCATGTTC CGCGCGCCGG TCTAGTCGGC
GTGCTGGGCC GCATCCTCGA TGCGCTCAAA GACGGCGGCG TCCTGGCGGC AAGTTTCAAG
TCCGGCAAGG CAGAGGGTCG CGACTGCTTC GGTCGTTTCT TCAACTACCC TTCGAGCGAC
GTTCTAGTGC GGCTCTTTGA TGAGGCAGGT TGGCCGGAAG TGGACGTAGC CGAAACGGAA
GGAAGCGGCT ATGACGGCGC ACCCACCCTT TGGCTCCATG CTACAGCCGT CAAGCTGCGA
AAATAG
 
Protein sequence
MPPFDSDHTS QFYRENAACY ASRPRRAPDT RLDTFLSRLR PGAAVLELGC GGGQDSAYMI 
AKGFDVTPTD GSPELAAEAS RLLGRKIAVL RFEELRWRDA FDGVWAEACL LHVPRAGLVG
VLGRILDALK DGGVLAASFK SGKAEGRDCF GRFFNYPSSD VLVRLFDEAG WPEVDVAETE
GSGYDGAPTL WLHATAVKLR K