Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1696 |
Symbol | |
ID | 5322554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1775117 |
End bp | 1776022 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790635 |
Product | ABC transporter related |
Protein accession | YP_001327367 |
Protein GI | 150396900 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATT TCCGCTCACC AGAAACGACG ACCTTGGTCA GTCTCGCCAA TGCGGGGGTG TGTCGAAACG GGAAATGGCT CGTACGCGGC GTCGATTTTT CGATCAGCCG CGGGGAGATC GTTACCCTCA TCGGTCCGAA CGGGTCGGGC AAGACGACCA CGGCGAAGAC GGCGATCGGC GTGCTCAAAC CGGATGAAGG TCATGTCGAG CGGGTTGCCG GCTTGCGGGT CGGCTACGTG CCCCAGAAGC TTGCCGTGGA CTGGACGCTG CCATTGACGG TCGAGCGGCT GATGACGTTG ACCGGGCCGC TGAAGCGCCG GGAAATCGAT GAGGCGCTTG CCGCGACGGG CATGCTGCAC ATGGCGAAGG CTGAGGTCCA GCATCTTTCG GGTGGCGAAT TCCAGCGGGC GCTTCTTGCG CGCGCGATCG CCCGCAAACC CGATCTTCTG GTCTTGGATG AGCCGGTGCA GGGCGTCGAT TTTTCCGGCG AAATTGCGCT CTACGAACTG ATCAAGCAGA TCCGCAATCG CACCGGCTGC GGGATACTGC TCATTTCGCA CGACCTCCAT ATCGTCATGG CGGAGACCGA TACGGTCGTC TGCCTCAATG GCCACGTCTG CTGTCGCGGA ACGCCGCAGG TGGTGAGCCA GAGCCCGGAA TACCTCAAGC TGTTCGGACG TCGGGCAGCC GGCGCTCTTG CCGTTTACAG TCACCACCAC GACCATACGC ACCTGCCGGA CGGGCGTGTG CTGCACGCCG ACGGCAGCAT CACCGAGAGC TGTTTTCCCG ACGACGGCCA TCACCACGGT GAAGCCGGCA ATATCCATGA TCACGAACCC GACTGCGGCT GCGGCCACCA CACGCGGCTG CAGGGCTACG ACGGTGCGGA GAAGCGTGAT GCTTGA
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Protein sequence | MLNFRSPETT TLVSLANAGV CRNGKWLVRG VDFSISRGEI VTLIGPNGSG KTTTAKTAIG VLKPDEGHVE RVAGLRVGYV PQKLAVDWTL PLTVERLMTL TGPLKRREID EALAATGMLH MAKAEVQHLS GGEFQRALLA RAIARKPDLL VLDEPVQGVD FSGEIALYEL IKQIRNRTGC GILLISHDLH IVMAETDTVV CLNGHVCCRG TPQVVSQSPE YLKLFGRRAA GALAVYSHHH DHTHLPDGRV LHADGSITES CFPDDGHHHG EAGNIHDHEP DCGCGHHTRL QGYDGAEKRD A
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