Gene Smed_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1696 
Symbol 
ID5322554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1775117 
End bp1776022 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID640790635 
ProductABC transporter related 
Protein accessionYP_001327367 
Protein GI150396900 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATT TCCGCTCACC AGAAACGACG ACCTTGGTCA GTCTCGCCAA TGCGGGGGTG 
TGTCGAAACG GGAAATGGCT CGTACGCGGC GTCGATTTTT CGATCAGCCG CGGGGAGATC
GTTACCCTCA TCGGTCCGAA CGGGTCGGGC AAGACGACCA CGGCGAAGAC GGCGATCGGC
GTGCTCAAAC CGGATGAAGG TCATGTCGAG CGGGTTGCCG GCTTGCGGGT CGGCTACGTG
CCCCAGAAGC TTGCCGTGGA CTGGACGCTG CCATTGACGG TCGAGCGGCT GATGACGTTG
ACCGGGCCGC TGAAGCGCCG GGAAATCGAT GAGGCGCTTG CCGCGACGGG CATGCTGCAC
ATGGCGAAGG CTGAGGTCCA GCATCTTTCG GGTGGCGAAT TCCAGCGGGC GCTTCTTGCG
CGCGCGATCG CCCGCAAACC CGATCTTCTG GTCTTGGATG AGCCGGTGCA GGGCGTCGAT
TTTTCCGGCG AAATTGCGCT CTACGAACTG ATCAAGCAGA TCCGCAATCG CACCGGCTGC
GGGATACTGC TCATTTCGCA CGACCTCCAT ATCGTCATGG CGGAGACCGA TACGGTCGTC
TGCCTCAATG GCCACGTCTG CTGTCGCGGA ACGCCGCAGG TGGTGAGCCA GAGCCCGGAA
TACCTCAAGC TGTTCGGACG TCGGGCAGCC GGCGCTCTTG CCGTTTACAG TCACCACCAC
GACCATACGC ACCTGCCGGA CGGGCGTGTG CTGCACGCCG ACGGCAGCAT CACCGAGAGC
TGTTTTCCCG ACGACGGCCA TCACCACGGT GAAGCCGGCA ATATCCATGA TCACGAACCC
GACTGCGGCT GCGGCCACCA CACGCGGCTG CAGGGCTACG ACGGTGCGGA GAAGCGTGAT
GCTTGA
 
Protein sequence
MLNFRSPETT TLVSLANAGV CRNGKWLVRG VDFSISRGEI VTLIGPNGSG KTTTAKTAIG 
VLKPDEGHVE RVAGLRVGYV PQKLAVDWTL PLTVERLMTL TGPLKRREID EALAATGMLH
MAKAEVQHLS GGEFQRALLA RAIARKPDLL VLDEPVQGVD FSGEIALYEL IKQIRNRTGC
GILLISHDLH IVMAETDTVV CLNGHVCCRG TPQVVSQSPE YLKLFGRRAA GALAVYSHHH
DHTHLPDGRV LHADGSITES CFPDDGHHHG EAGNIHDHEP DCGCGHHTRL QGYDGAEKRD
A