Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1465 |
Symbol | |
ID | 5322323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1546985 |
End bp | 1548226 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790413 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_001327145 |
Protein GI | 150396678 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.204095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0534707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATT CTGTGCCGGT GCCGGCCTAT GACGTAGAAG CGATCCGAAA GGACTTTCCG ATCCTCTCAA GATCGGTCTA CGGCAAACCG CTCGTCTATC TCGACAACGG CGCATCGGCG CAGAAGCCGC AGCTCGTCAT CGATGCTGTT TCCAATGCCT ATTCCAACGA GTATGCCAAC GTCCATCGTG GCTTGCATTT TTTGTCGAAT GCCGCGACGG AGGCTTATGA GCAGGCGCGC GAAAAGGTAC GCCGTTTCCT GAATGCGCCA TCGGTCGACA ATATCATCTT CACCAAGTCC TCGACCGAGG CGATCAACAC CGTGGCCTAC GGCTACGGAA TGCCCAGGCT CGGCGAGGGG GATGAGATCG TAATTTCGAT CATGGAGCAT CACTCCAACA TCGTGCCCTG GCACTTCATA CGCGAGCGGC AGGGCGCCAA GCTCGTTTGG GCGCCAGTCG ATGGCGATGG CGCGTTTCAC ATCGAGGATT TCGTCGCGTG CGTGACGGAG CGCACTAAAC TTATTGCCGT CACACACATG TCGAATGCTC TGGGTACGGT TGTTCCGGTG AAGGAGATTT GCCGCATTGC CCGCGAGCGT GGAATCCCGG TGCTCATCGA CGGTAGCCAG GGCGCGGTGC ATATGCCCGT CGACGTCCAG GACATCGATT GCGACTGGTA TGTGATGACT GGTCACAAGC TCTACGGTCC TTCCGGCATC GGCGTTCTCT ACGGCAAGAC CGAACGGTTG AAGGAAATGC GCCCCTTCAT GGGAGGCGGC GAGATGATCG AGGAAGTCAC CGAGGAACGC GTCACCTATA ACGATCCGCC CCACCGCTTC GAGGCCGGCA CGCCGCCGAT CGTCCAAGCG ATCGGGCTCG GCTATGCGCT TGATTACATG GAAAAGATCG GTCGTGAAGC CATCAGGGCG CATGAGGCGG ATCTGACGAC CTACGCCCGC GAACGTCTGT CCGGGGTCAA TTCTCTCCGC GTCTTTGGCG ACGCGGCCGG CAAGGGAAGC ATCTTTTCCT TTGAGCTCGC CGGCATCCAC GCCCACGACG TCTCCATGGT GATCGACCGT GCCGGCATAG CGGTCAGGGC CGGCACGCAT TGTGCGCAGC CGCTCTTGAA TCGGTTCGGC GTCACCTCCA CATGCCGAGC GTCCTTCGGT CTCTACAACA CCCGCGCCGA GGTCGACGCG CTGGCGGACG CGCTGGAACA CGCACGCAAA TTTTTCGCTT AG
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Protein sequence | MEHSVPVPAY DVEAIRKDFP ILSRSVYGKP LVYLDNGASA QKPQLVIDAV SNAYSNEYAN VHRGLHFLSN AATEAYEQAR EKVRRFLNAP SVDNIIFTKS STEAINTVAY GYGMPRLGEG DEIVISIMEH HSNIVPWHFI RERQGAKLVW APVDGDGAFH IEDFVACVTE RTKLIAVTHM SNALGTVVPV KEICRIARER GIPVLIDGSQ GAVHMPVDVQ DIDCDWYVMT GHKLYGPSGI GVLYGKTERL KEMRPFMGGG EMIEEVTEER VTYNDPPHRF EAGTPPIVQA IGLGYALDYM EKIGREAIRA HEADLTTYAR ERLSGVNSLR VFGDAAGKGS IFSFELAGIH AHDVSMVIDR AGIAVRAGTH CAQPLLNRFG VTSTCRASFG LYNTRAEVDA LADALEHARK FFA
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