| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1186 |
|---|
| Symbol | |
|---|
| ID | 5322033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1266132 |
|---|
| End bp | 1267115 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640790128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001326872 |
|---|
| Protein GI | 150396405 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria
[COG4549] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.057245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.213641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TCAGACTTTC TCTTCTTACG GCAGGGCTGA CGCTTTCCGC CGCGGGCTTC
GCCCATGCGC ATGCGACATT CGAGAAGGGC AGTGCTTCCG CCGGAGAAAC CTTCAACGCC
ACCCTTCAGG TGCCCCATGG CTGCGACGGC AAGGCGACGA CCGAAGTGCG GGTGCGGCTG
CCCGAGGGTT TCGTGTTCGC CAAGCCTCAG CCAAAGCCGG GTTGGGAACT TGAGATCATT
GAGGGCGACT ACGGGAATAC GTACGACAAC CATGGCACCA AGGTCTCGGC CGGTCCCGTC
GAGATCCGCT GGAAAGGCGG CAATCTGCCA GACGCGTACT ACGACACCTT TGTCGTACGC
GGCAAATTCG CGGGCTTCGA AAAGGAGACC GTGCTCGCCT TCCCGACGAC GCAGCTTTGC
GGCGAGGACG GCAAGGTGGT CTGGGATCAG GTGCCGGCAG AGGGCCAGGA CCCCCATTCC
CTCGATCAGC CTGCACCGAC CATCACGATC ACAATGGCCG GAGGCGACGA TCCGCATGTC
GGCCACGGGA GCCTGCCTCA ATCCGCGGCC GAAACGGTCA AGCTCGGCGA TCTCGATATC
TCGGGAGGAG CTGTGAAGGC TATGTTGCCC GGCGCCAAGG TCGGCGGCGG CGGCTTCCTC
GTCAAGAACA ACGGCAGTGT CGACGACCGC CTGATTGCCG TCGAGAGCCC CGCTGCCGGC
CGTGTCGAAC TCCATGAAAT GACGATGGAG AACGACGTCA TGAAAATGCG CAAGCTCGAC
GAAGGCATTG CCGTCCCCGC CGGCGAAACG GTCGAACTGA AAAATGGCGG CCTGCATCTC
ATGTTCATGG AGGTGGAGAA GCCCTTTGCC GAAGGCGACA CCGTGCCGGT GACGCTTACC
TTCGAGAAGG CCGGGAAGGT CGAATATGTC CTGCCCGTCG GCACCGCAGC GGGCGGCGCT
CATTCCGGGC ACAGCCATCA ATAA
|
|---|
| Protein sequence | MNKIRLSLLT AGLTLSAAGF AHAHATFEKG SASAGETFNA TLQVPHGCDG KATTEVRVRL
PEGFVFAKPQ PKPGWELEII EGDYGNTYDN HGTKVSAGPV EIRWKGGNLP DAYYDTFVVR
GKFAGFEKET VLAFPTTQLC GEDGKVVWDQ VPAEGQDPHS LDQPAPTITI TMAGGDDPHV
GHGSLPQSAA ETVKLGDLDI SGGAVKAMLP GAKVGGGGFL VKNNGSVDDR LIAVESPAAG
RVELHEMTME NDVMKMRKLD EGIAVPAGET VELKNGGLHL MFMEVEKPFA EGDTVPVTLT
FEKAGKVEYV LPVGTAAGGA HSGHSHQ
|
|---|
| |