| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0815 |
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| Symbol | |
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| ID | 5321652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 878050 |
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| End bp | 879381 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789752 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001326506 |
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| Protein GI | 150396039 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.418141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.712241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAA AAAACGGAAT TGATGCTTTC TCGCGCCGCG CATTTCTGCG TTCGGCCGCA
ACCTTCGGTG CCGCCGCATG GGCGGGCGCC GCCAGCGCCC AGGATGCGCT GAACGAAATC
ATCAATTCGC CGCGCCGCGG CTCCTGGGAC GACCAGTTCG ACGCAAAGGC TTCGCGTACG
GCTACGGCGG TACTGTCGAA CACGCCAGTC TTCGGCCCCG AAACGATTGC GCTTCTGCAG
CAGGCGATCC TGGATTACCA GCAGATCGCA GCCGCCGGAG GCTGGCCTAT GGTCAATCCC
GCGAGCACCC AAAGGCTCGA ACTCGGCGTT AACGATCCTG CCGTTCAGCA ATTGCGCCAG
CGTCTGATGA TCTCGGGCGA TCTGCCGCAA TCGGCGGGTA TTTCCCCTTC CTTCGATTCC
TATGTCGATG GTGCTGTCAA GCGCTTCCAG GCACGTCATG GCCTGCCGGC GGACGGCGTC
ATCGGCGAAT ACAGCCTGAA GGCTCTGAAC GTCGACGCCT CGACCCGGCT TGCCCAGCTC
GAGACCAACC TGGTGCGGCT TCAGTCGATG TCGGGCGATC TCGGCCGGCG CTACGTCATG
GTCAACATTC CGGCAGCCTA TATCGAGGCG GTGGAGAACG GCCGGGTGGC GCTGCGCCAT
ACGGCTATCG TCGGCAAGAT CGATCGCCAG TCGCCGATTC TCAATTCAAA GATTTACGAG
GTCATCCTCA ACCCCTATTG GACGGCGCCG CGCTCGATCA TCCAGAAAGA TATCATGCCG
CTGATGCGTA AGGATCCGAC TTATCTCGAG CGCAATGCGA TCCGTCTCCT CGACGGCAAT
GGCAACGAAG TGTCGCCGGA AACCATCGAC TGGCAGGCCG AGAAGGCGCC GAACCTTATG
TTCCGCCAGG ATCCCGGCAA GATCAACGCG ATGTCTTCGA CGAAGATCAA TTTCCATAAC
GAGCATGCCG TCTATATGCA CGACACCCCG CAGCAGGGCC TGTTCAACAA GCTGATGCGC
TTCGAATCCT CCGGTTGCGT CCGTGTGCAG AACGTTCGCG ATCTATCCAC CTGGCTGCTC
AAGGAAACGC CCGGCTGGTC GCGCCAGCAG ATCGAGGGTA CGATCAAGTC CGGCGTCAAC
ACGCCGATCA AGCTTGCCGA AGAGGTCCCG GTCTATTTCA CCTATATAAC CGCCTGGTCG
GCGAAGGACC GCGTCGTCCA GTTCCGCGAC GATATCTACC AGCGCGACGG CGCGGCGGAG
CTTGCGCTGC AGACGACGAC GGGCATCGAG CAATCGGCTG GTCCGATCGA CGCGGACGCC
TTGCCGCAAT AA
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| Protein sequence | MSKKNGIDAF SRRAFLRSAA TFGAAAWAGA ASAQDALNEI INSPRRGSWD DQFDAKASRT
ATAVLSNTPV FGPETIALLQ QAILDYQQIA AAGGWPMVNP ASTQRLELGV NDPAVQQLRQ
RLMISGDLPQ SAGISPSFDS YVDGAVKRFQ ARHGLPADGV IGEYSLKALN VDASTRLAQL
ETNLVRLQSM SGDLGRRYVM VNIPAAYIEA VENGRVALRH TAIVGKIDRQ SPILNSKIYE
VILNPYWTAP RSIIQKDIMP LMRKDPTYLE RNAIRLLDGN GNEVSPETID WQAEKAPNLM
FRQDPGKINA MSSTKINFHN EHAVYMHDTP QQGLFNKLMR FESSGCVRVQ NVRDLSTWLL
KETPGWSRQQ IEGTIKSGVN TPIKLAEEVP VYFTYITAWS AKDRVVQFRD DIYQRDGAAE
LALQTTTGIE QSAGPIDADA LPQ
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