| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0458 |
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| Symbol | |
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| ID | 5321292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 495559 |
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| End bp | 496575 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789393 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001326150 |
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| Protein GI | 150395683 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.480075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCGTAG TGATACCGCT GGAAGACAAT AAAAACAAAC AGGCATCTGT GAAGCCGCTT
GTCGACCTGA CGCAGTCGGA TATGGAGCGG GTCAACCAGC TTATTCTTTC CAAGGCCGGT
TCCGACGTCC AGATGATCCC CGAAGTCGCC AACCACCTGA TCTCCTCGGG CGGCAAACGG
CTCCGGCCGA TGCTGACGCT CGCCGCCGCT TCGATGTTCG GCTACGAGGG TGACGGCCAC
GTCAAACTCG CCACCAGCGT CGAGTTCATG CACACCGCGA CCCTGTTGCA TGACGATGTG
GTCGACGAGA GCGACCTGAG GCGCGGCAAA TCGACGGCGC GGACGATCTG GGGCAACCAG
GCGAGCGTAC TCGTCGGCGA TTTCCTGCTT GGACAGGCTT TTCGAATGAT GGTCGATGTC
GGCTCGCTGG ACGCGCTCGA CGTGCTTTCA ACCGCCGCTT CGGTCATCGC GGAAGGCGAG
GTCCTGCAGC TTTCGGTTGC CAAGAACATG GAGACGACCG AGGACGACTA CCTGCAAGTC
ATTCGCGCCA AGACTGCGGC GCTCTTCGCT GCCGCATCCG AGGTCGGGCC GATCGTCGCG
AGCGCAAGCA AGGCGGACCG CAATGCGCTG AAGTCCTACG GCACGAATCT CGGCCTCGCG
TTCCAGCTGG TCGACGACGT TCTCGACTAT GGGGGTTCGT CGAGCGATCT CGGGAAGAAT
GTCGGAGACG ATTTCCGCGA AGGCAAGATC ACGCTGCCGG TCATTCTCTC CTATCGGCGC
GGTACGCCGC AAGACCGGGC GTTCTGGCGC GAGGCTATCG AGGGCGGCGC CAGCGACGAG
GCAAACCTCG AAAAAGCCCT GAGCCTCATC CATCGCTACG GGGGGCTGAC AGATACGATC
GCCCGCGCCA AGCACTACGG CACAATCGCT CGTGACGCGC TGGCGCCGTT GCCGGTCTCG
CCGTGCAAAT CGGCGCTCGT CGAAGTGATC GATTTCTGCA TCGACCGGGT AAGTTGA
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| Protein sequence | MGVVIPLEDN KNKQASVKPL VDLTQSDMER VNQLILSKAG SDVQMIPEVA NHLISSGGKR
LRPMLTLAAA SMFGYEGDGH VKLATSVEFM HTATLLHDDV VDESDLRRGK STARTIWGNQ
ASVLVGDFLL GQAFRMMVDV GSLDALDVLS TAASVIAEGE VLQLSVAKNM ETTEDDYLQV
IRAKTAALFA AASEVGPIVA SASKADRNAL KSYGTNLGLA FQLVDDVLDY GGSSSDLGKN
VGDDFREGKI TLPVILSYRR GTPQDRAFWR EAIEGGASDE ANLEKALSLI HRYGGLTDTI
ARAKHYGTIA RDALAPLPVS PCKSALVEVI DFCIDRVS
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