Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0412 |
Symbol | ileS |
ID | 5321246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 443003 |
End bp | 445912 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789347 |
Product | isoleucyl-tRNA synthetase |
Protein accession | YP_001326104 |
Protein GI | 150395637 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0060] Isoleucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.861569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA CCGCTGAAAA GATCGACTAT TCCTCTACCC TTTACCTGCC GCAGACGGAC TTTCCGATGC GTGCGGGTCT GCCGCAGAAG GAGCCGGAGA CCGTCGCCCG TTGGCAGAAT ATGGAGCTTT ACAAAAAGCT GCGCGCATCG GCTGCCGGCC GCGAGAAGTT CGTCCTGCAT GATGGCCCGC CCTATGCCAA CGGCAACATC CATATCGGTC ATGCGCTGAA CAAGATCCTC AAGGATGTGA TCAACCGATC GTTCCAGATG CGCGGCTTCG ATGCGAACTA CGTCCCAGGC TGGGACTGCC ACGGCCTGCC GATCGAATGG AAGATCGAGG AAAAATATCG GGAAAAGGGC AAGAACAAGG ACGAGGTCCC GGTCAACGAG TTCCGTAAGG AATGCCGTGA ATTCGCCAGC GGCTGGATCG GTGTCCAGAC GGAGGAATTC AAGCGTCTCG GCATCGAGGG AGACTTCGAA AACCCTTACA CCACGATGAA CTTCCACGCG GAGGCGCGCA TCGCCGGCGA GTTGATGAAG ATCGCCAGGT CAGGTCAGCT CTATCGCGGC TCGAAGCCGG TCATGTGGTC GGTCGTCGAA CGTACGGCCC TTGCCGAGGC CGAAGTCGAA TATGCCGACG TCGAAAGCGA TATGATCTGG GTGAAGTTCC CGGTAACCCA GGGGCCCGAT GCGCTTGCCG GCGCCTTTGT AGTCATCTGG ACCACGACCC CCTGGACGAT CCCCGGCAAC CGAGCGATCG CCTATTCGTC ACGCTATGCC TACGGGCTTT ACGAGGTCGC GGCCGCCGAG AACGATTATG GTCCTCAGCC GGGCGAGAAG CTGATCTTCG CCAAGCGGCT CGCCGAGGAG TCGGCTGCCA AGGCGAAGGT GACGTTCAAG TTCGTACGCG ATATCGAGGC GGACGAGCTC GGGGCGGTCA CTTGCGCGCA TCCGTTGCAC GGGCTCGGCG GCGGCTATGC CTTTCATGTG CCGTTACTCG ACGGCGATCA CGTGACCGAC GATGCCGGCA CTGGCTTCGT TCACACGGCT CCCGGCCATG GCCGCGAGGA CTTTGATGCC TGGATGGACA GCGCCCGGGC ACTTGAAGCG CGCGGCATCT CCTCTGCCAT CCCCTTCACG GTCGACGATG CGGGCTACTT CACGGCCGAT GCACCCGGCT TTGGTCCGGA TGCGGAAGGC GGCGCCGGCC GGGTCATCGA CGACAAGGGC AAGAAGGGCG ATGCCAACGA GCGAGTCATA AAAGCCCTGA TCGGCCGGCA TGCGCTCTTT GCGCGGGGCC GATTGAAGCA TTCCTATCCG CATTCCTGGC GGTCGAAGAA GCCGGTCATC TTCCGCAACA CGCCGCAATG GTTCGTGTAC ATGGACAAGG ATTTCGGCGA TGGCACGACG TTGCGTTCGC GTGCGTTGAA CGCCATAGAC GGAACCCGTT TCGTCCCCGG CGCCGGCCAG AATCGTCTGA GGGCGATGAT CGAGCAGCGT CCCGACTGGG TCCTTTCGCG CCAGCGCGCC TGGGGCGTGC CGATCGCAAT CTTCGCCAGC GACGAAGGCG AGATCCTCGC CGACGACGAG GTCAATTCCC GCATACTCGA TGCGTTCGAG AAGGAGGGAG CGGACGCCTG GTTCGCCGAA GGTGCGAAGG AACGCTTCCT CGGCAAGGAT CACGATCATA CGCGCTGGCA CCAGGTCATG GACATTCTTG ACGTCTGGTT TGATTCCGGG TCGACCCACA CTTTCACGCT GGAGGACCGC CCGGACCTGA AATGGCCCGC TGACGTCTAC CTGGAAGGCT CAGATCAACA CCGCGGCTGG TTCCATTCTT CGCTGCTCGA AAGCTGCGCG ACCCGCGGGC GCGCGCCGTA TAACGCCGTC ATCACCCATG GCTTCACCAT GGATGAGAAG GGCGAGAAGA TGTCGAAGTC GAAGGGCAAT ACGGTCACGC CTCAAGAAGT GATGAAGGAT GCAGGCGCCG ACATCCTGCG TCTATGGGTC ATGACGACGG ACTATTGGGA AGACCAGCGC CTGGGCAAGA CCATCATCCA GACGAATATC GACGCCTACC GAAAGTTGCG CAACACCGTG CGCTGGATGC TCGGCACGCT CGCGCACGAC AAGGGCGAAG TCGTTGCGCT TTCCGAAATG CCGGAGCTTG AAAGGTTGAT GCTGCATCGC CTTGCCGAAC TCGACCGGCT GGTTCGCGAA GGCTACGATG CCTTCGACTT CAAGAGGATC GCCCGGTCGC TCATCGATTT CTCGAATGTG GAACTTTCCG CCTTCTACTT CGATATCCGC AAGGATGCGC TCTATTGCGA TGCTCCGTCG TCGCTGCGCC GCCGCGCTTC GCTGCAGGTC ATCCGCACCG TTTTCGATTG CCTGGTGACC TGGTTTGCAC CCATGCTGCC CTTCACTGCC GAGGAGGCCT GGCTTTCGCG CAATCCACAA GCCGTTTCCG TGCATCTCGA ACAGTTCCCC GAGGTCCCCG CGAAGTGGCG CAACGACGCG CTTGCCGAAA AGTGGCGGAA GATCCGCGAG GTCCGCAAAG TCGTGACCGG CGCGCTCGAG ATCGAGCGCA AGGAAAAACG CATCGGCTCT TCGCTCGAGG CGGCTCCCGT CGTCCACGTC GCCGACCCGG ATCTGCACGG AGCGCTCGAC GGCCAGGACT TCGCCGAAAT CTGCATCACC TCGGCAATCG AGATCGACGG GGGCGAAGGT CCTGCAGGCG CCTTCACGCT GCCGGAGGTC GCCAAGGTTA GAGTCGTGCC GAAACTCGCC GAGGGACGCA AATGCGCTCG CTCCTGGCGA ATCACTACGG ATGTGGGCTC CGATCCGCTC TATCCGGACG TCTCCGCGCG CGACGCGGCC GCCCTGCGGG AGCTCGGCTT CAAGCCGTAA
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Protein sequence | MTETAEKIDY SSTLYLPQTD FPMRAGLPQK EPETVARWQN MELYKKLRAS AAGREKFVLH DGPPYANGNI HIGHALNKIL KDVINRSFQM RGFDANYVPG WDCHGLPIEW KIEEKYREKG KNKDEVPVNE FRKECREFAS GWIGVQTEEF KRLGIEGDFE NPYTTMNFHA EARIAGELMK IARSGQLYRG SKPVMWSVVE RTALAEAEVE YADVESDMIW VKFPVTQGPD ALAGAFVVIW TTTPWTIPGN RAIAYSSRYA YGLYEVAAAE NDYGPQPGEK LIFAKRLAEE SAAKAKVTFK FVRDIEADEL GAVTCAHPLH GLGGGYAFHV PLLDGDHVTD DAGTGFVHTA PGHGREDFDA WMDSARALEA RGISSAIPFT VDDAGYFTAD APGFGPDAEG GAGRVIDDKG KKGDANERVI KALIGRHALF ARGRLKHSYP HSWRSKKPVI FRNTPQWFVY MDKDFGDGTT LRSRALNAID GTRFVPGAGQ NRLRAMIEQR PDWVLSRQRA WGVPIAIFAS DEGEILADDE VNSRILDAFE KEGADAWFAE GAKERFLGKD HDHTRWHQVM DILDVWFDSG STHTFTLEDR PDLKWPADVY LEGSDQHRGW FHSSLLESCA TRGRAPYNAV ITHGFTMDEK GEKMSKSKGN TVTPQEVMKD AGADILRLWV MTTDYWEDQR LGKTIIQTNI DAYRKLRNTV RWMLGTLAHD KGEVVALSEM PELERLMLHR LAELDRLVRE GYDAFDFKRI ARSLIDFSNV ELSAFYFDIR KDALYCDAPS SLRRRASLQV IRTVFDCLVT WFAPMLPFTA EEAWLSRNPQ AVSVHLEQFP EVPAKWRNDA LAEKWRKIRE VRKVVTGALE IERKEKRIGS SLEAAPVVHV ADPDLHGALD GQDFAEICIT SAIEIDGGEG PAGAFTLPEV AKVRVVPKLA EGRKCARSWR ITTDVGSDPL YPDVSARDAA ALRELGFKP
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