| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0988 |
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| Symbol | |
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| ID | 5325787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 1004910 |
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| End bp | 1005989 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640786664 |
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| Product | H/ACA RNA-protein complex component Cbf5p |
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| Protein accession | YP_001323503 |
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| Protein GI | 150399736 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTGG AATTAATCGT AAAAGAAGAG TCAAAGACAA ATTATGAACA TGGTTGTGAG
CCATATAAAC GAGATATTAA AACGCTTTTA AATACTGGCG TTGTTGTAAT TGATAAACCA
TCTGGCCCAA CGTCTCATGA AGTTTCTGCA TGGGTTAGAA ACATGTTAAA ATTAGAAAAA
GCAGGCCACG GCGGAACTCT TGACCCAAAA GTTACAGGGG CACTCCCAAT TGCTTTAGGG
GGTGCAACAA AGTGCGTATC AATTTGGCAT ATTCCCCCAA AAGAATACGT CTGTTTAATG
CAGTTACACG ACGATGCTAA ATTGGAAGAT ATAAAAAGAG TTTTTAATGA ATTTACTGGA
AGAATTCACC AAAGGCCTCC TTTAAAAGCT GCTGTAAAGA GAAATTTAAG AATTAGAAAA
ATTTATGAAA TTGAAATTTT AGAGCACTTT GAAAGAAAAG TACTTTTTAA AACAAGATGC
CAATCTGGAA CATACATTAG AACACTTGTA AGTGATGTAG GAGAAGCTTT AGGGACTTCT
GCACACATGC AGGAACTTAG AAGAACCATA AGTGGCCCTT TTAATGAAAA TGAAGCAGTT
TATTTACAGG ATTTACTTGA TGCATATATA TTTTGGAAAG AAGATGGAAA TGAGGAAGAG
TTAAGAAAAC TTGTAAAACC GCTTGAATAC GGATTACAGT ATTTAAAAAA GGTCGTTATA
AAAGATAGTG CGGTTGATGC AGTTTGCCAT GGTGCTCAAC TTTACGCATC AGGAATATCA
AAAATTGAAA AGGGAATTGG AACTGACGAA TTAGTTTTAA TTGAAACATT AAAAGGCGAA
GCTGTTGCTG TTGGAAAACC CTTAATGAAT ACAAAAGACA TGTTAAAAGC AGAAGAAGAT
GTTGTTGTAG ATATTGAAAG AGTAATAATG GAAACTGGAA TTTATCCAAG AATGTGGAAA
AAAAGAAATA AGCAAGGTAA ACCTACCCCT AAAAAAATTG ATGCTGTAAA AAAAGATGTG
AATAAAGGAT TAAATAAAGA TGAGAAGAAA GATATAAAAA AGAATCAACT AAAGATATAA
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| Protein sequence | MILELIVKEE SKTNYEHGCE PYKRDIKTLL NTGVVVIDKP SGPTSHEVSA WVRNMLKLEK
AGHGGTLDPK VTGALPIALG GATKCVSIWH IPPKEYVCLM QLHDDAKLED IKRVFNEFTG
RIHQRPPLKA AVKRNLRIRK IYEIEILEHF ERKVLFKTRC QSGTYIRTLV SDVGEALGTS
AHMQELRRTI SGPFNENEAV YLQDLLDAYI FWKEDGNEEE LRKLVKPLEY GLQYLKKVVI
KDSAVDAVCH GAQLYASGIS KIEKGIGTDE LVLIETLKGE AVAVGKPLMN TKDMLKAEED
VVVDIERVIM ETGIYPRMWK KRNKQGKPTP KKIDAVKKDV NKGLNKDEKK DIKKNQLKI
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