| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0253 |
|---|
| Symbol | aroE |
|---|
| ID | 5324922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 296617 |
|---|
| End bp | 297471 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640785916 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_001322774 |
|---|
| Protein GI | 150399007 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.624987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAGATT CTAAAACAGT ACTTCTTGGA CTTATTGGCC ATCCTGTTGA GCATTCTTTT
TCACCAATTA TGCACAATGC TGCAATAAAT GACTTAAAAA TAAATTATGT GTATTTAGGA
TTTGATATTT CAAATGAAAA TTTAAAAAAT GTTGTAAATT CTGCAAAAAC ACTCAGTATT
TTGGGTTTTA ATGTTACAAT TCCGTATAAG GTAGAAATAA TGAAGTACCT TGACAAAATC
GATGATACTG CAAAGTTTAT TGGTGCTGTA AATACTGTAA AAATTGAAAA TGGGGAGGCT
GTTGGGTATA ATACGGATGG AATTGGTGCA AAAAAATCCC TTGAAGAAGA AATTGGCAAA
TTTAATAATA AAAATATATT AATGATTGGC TCAGGCGGTT CTTCAAGATC AATTTCTTTT
GAACTTGCAA AAGAGAATGA AATAACGATA ATAAATAGAA ATATAAAAAA TGCAAAAGAA
TTGTCATTTG AAATTTCTAA GAATTTAGCT ACTAAGGAGT ATGGTGAAAA ATACCTAAAA
TACGGCGATT TATCAACAGA TATTTCAAAA TTCGATATTA TTATAAACAC AACTCCAGTT
GGAATGTACC CTGATGTTAA TTCAAAGCCT GTAATTCCAT TAAAAAATGC AAAAAATGAT
GCTATTATCA TGGATATAAT TTATAATCCT TTTGAACCAG TTTTTTTAAA AGAAGCTAAA
AAATATGGTT TAAAGACGTT AAATGGCCTT GGAATGCTTA TTTACCAAGG TGCAGTTTCT
TTTGAGATAT GGACAGGATT TAAACCAGAT ACTAACGTAA TGAAAAACAG CATTGTTAAT
TTACTTAAAA GTTAA
|
|---|
| Protein sequence | MIDSKTVLLG LIGHPVEHSF SPIMHNAAIN DLKINYVYLG FDISNENLKN VVNSAKTLSI
LGFNVTIPYK VEIMKYLDKI DDTAKFIGAV NTVKIENGEA VGYNTDGIGA KKSLEEEIGK
FNNKNILMIG SGGSSRSISF ELAKENEITI INRNIKNAKE LSFEISKNLA TKEYGEKYLK
YGDLSTDISK FDIIINTTPV GMYPDVNSKP VIPLKNAKND AIIMDIIYNP FEPVFLKEAK
KYGLKTLNGL GMLIYQGAVS FEIWTGFKPD TNVMKNSIVN LLKS
|
|---|
| |