Gene Smed_6358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6358 
Symbol 
ID5320661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp24412 
End bp25398 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID640777951 
Producthypothetical protein 
Protein accessionYP_001314883 
Protein GI150378289 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG TCTTTGCCGC CCTGTTCACG ATCATGGCGG CCGATGCGCA AGCCCATGAG 
GCTGGCGCCG AAGCCGGAGA TCCGTGGAAC TATCTGTTTG TCGTACTGCC GCTCGCGCTA
ACCGCGCTGG CATACGCTAT TGGCATGCGC AGGCTATGGT CCGCATCGGC AAGAGGCCAG
ACGATCCATC TGCAGCGGGC CGTATGCTTT GCCGCCGGCT GGCTCTTCCT GGCGGCTGCG
CTCGTGTCGC CGCTGGACAG GCTGGCGACG CAGCTCTTCA CCGCCCATAT GATCGAACAC
GAGATACTGA TGGTGATCGC CGCGCCGCTC TTCGTCCTGT CGAAGCCGCT CGCGCCTCTG
CTCTGGTCCC TGCCGCAGAA GCTTCGAGTG TCGGTCGGCC GAGCACTCGT CCGCAGCGTC
GTCCTTCTTC CCGTCCGTAA GGCGGCGACC AATCAGCTCG TCGCGACTGG CCTGCATGCC
GCGGCTCTGT GGCTCTGGCA CGCGCCGCGT CTCTACGATG CCGCACTGGC CGAAACGCCG
GTTCACTGGC TTCAGCATCT AAGCTTCTCC TGCACCGCCC TTATCTTCTG GTGGGCGCTG
CTTTTCGGGC GCGGCCGGCA GGATTACGGC ACCGCCATCT TCTATCTTTT CGCGACCACG
CTTCACTCCG GCTTCCTTGG CGTCCTGCTC TCCTTCGCGC GTGAGCCGCT CTACCGCAGT
CAGGGCGCCG GCGCTGCAAG CTGGGGCCTG TCGGCGCTCG AGGACCAGCA GCTTGCCGGT
CTGATCATGT GGGTACCGGC AGGCATGATA TACGTCGCCG CGGCTCTCGC CCTCGCCGCC
GCCTGGATCG GCGGCTCAAA CGCTTCCTTC GCCGGGGCAA TCAACGATGA CGCGGGCGCG
CGCGGGGGGC AAGCTGCTGT GCCTGAAGCG GCCTGCGAAA CGGCTCGCAT CGCTCTTAGC
GCGCCGGGGA GTAGTGGACA GTGCTAG
 
Protein sequence
MRIVFAALFT IMAADAQAHE AGAEAGDPWN YLFVVLPLAL TALAYAIGMR RLWSASARGQ 
TIHLQRAVCF AAGWLFLAAA LVSPLDRLAT QLFTAHMIEH EILMVIAAPL FVLSKPLAPL
LWSLPQKLRV SVGRALVRSV VLLPVRKAAT NQLVATGLHA AALWLWHAPR LYDAALAETP
VHWLQHLSFS CTALIFWWAL LFGRGRQDYG TAIFYLFATT LHSGFLGVLL SFAREPLYRS
QGAGAASWGL SALEDQQLAG LIMWVPAGMI YVAAALALAA AWIGGSNASF AGAINDDAGA
RGGQAAVPEA ACETARIALS APGSSGQC