| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5081 |
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| Symbol | |
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| ID | 5319383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 28956 |
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| End bp | 29861 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776861 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001313793 |
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| Protein GI | 150377198 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.302501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCGCCTG AAGAAATCAA GTCGCGTGTC GGTTCGGGGC TCTTGTCCTT TCCGGTCACG
CACTTCACGT CGGATTACAA GCTCAATCTC GAAAGCTACC GGCGTCATGT GGAGTGGCTT
TCGGGCTTCG GGGCCGCGGC CCTGTTTGCC GCCGGCGGCA CCGGCGAGTT CTTTTCGCTC
TCGCCGGATG AAGTGGGTGA GGTCACCCGT GCGGCGAAGG ACGTATCGGG CGAGGTGCCG
ATCATTGCGG GTTGCGGCTA TGGCACGTCC CTTGCGGTCG AGACGGCGAA AATAGTCGAG
GCGGCGGGCG CCGACGGCAT TCTCCTGCTG CCGCACTATC TCACCGAAGC GCCGCAGGAA
GGCATCTACG CTCATGTGAA GGCCGTATGC GATTCAACAG GTCTCGGGGT CATTCTCTAC
AACCGCGCCA ATTCCATCGC GAATGCCGAC ACGGTTGCGC GCCTGGCTGA GGCCTGCCCC
AACCTGATCG GCTTCAAGGA CGGTACCGGC AAAGTCGACC TCGTGCGCCA CGTGACGGCC
AAGCTCGGCG ACCGGCTCTG CTACATAGGC GGAATGCCGA CCCACGAGCT CTTCGCAGAA
GGCTTCAACG GCGTCGGCGT TACCACCTAT TCGTCGGCGG TGTTCAATTT CGTGCCGGAG
CTGGCACAGC GCTTCTATCG GGCAATGCGG GCCGGCGACA AGGCGGTGAT GGAAGGGATC
CTTCAGACGT TCTTTTTCCC GTTTGCAGCC CTGCGCGACC GCAAGGCCGG TTATCCGGTC
TCCATCATCA AGGCGGGCGT GGAGCTTGCC GGCTTTGCGC CCGGCCCGGT GCGCCCGCCC
CTGGTCGATC TGACCGGCGA AGAGCGGGAG ATATTGCAGG GGCTGATAGA AGCGTCGCGC
AACTGA
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| Protein sequence | MSPEEIKSRV GSGLLSFPVT HFTSDYKLNL ESYRRHVEWL SGFGAAALFA AGGTGEFFSL
SPDEVGEVTR AAKDVSGEVP IIAGCGYGTS LAVETAKIVE AAGADGILLL PHYLTEAPQE
GIYAHVKAVC DSTGLGVILY NRANSIANAD TVARLAEACP NLIGFKDGTG KVDLVRHVTA
KLGDRLCYIG GMPTHELFAE GFNGVGVTTY SSAVFNFVPE LAQRFYRAMR AGDKAVMEGI
LQTFFFPFAA LRDRKAGYPV SIIKAGVELA GFAPGPVRPP LVDLTGEERE ILQGLIEASR
N
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