Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5030 |
Symbol | |
ID | 5318778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1551919 |
End bp | 1552398 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776812 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_001313744 |
Protein GI | 150377148 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4454] Uncharacterized copper-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.4583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.77741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCTC ATATCTTCGG ACTTCTCGTC GCGGCGCTCG CCACCCCGGC GCTCGCTTCC GGCAGTCACG AGGGCGGTCA TGGCGAAGCC ATGGCTGTCG GCGAGCCCGG CAAGAAAGCA AGCGCCACCC GGACAATTGA GGTCACGATG AAGGAGACGG ACGACGGCCG GATGATCTTC ACGCCATCGA CCTTCAAGGT CAGCAAGGGC CAGACCATCC GCTTCGCGAT CAAGAACGCC GGCGGGCTCG ATCACGAGTT CGTGCTCGAC CAGGAGGACA AGATCATGGA GCACAAGGCG GTGATGGAGA AGTTCCCGGA GATGGAGCAC GACGATCCGA ACGCCATCCG TCTCGCCGCC GGAGAGTCCG GCGAGATCAT CTGGAAGTTC ACGAACGACG GCACGTTCAA GATCGCTTGC CTGGTGCCGG GTCACTACGA CGTGGGCATG CACGGCGACG TCACCGTTGC CAAGAAGTGA
|
Protein sequence | MKAHIFGLLV AALATPALAS GSHEGGHGEA MAVGEPGKKA SATRTIEVTM KETDDGRMIF TPSTFKVSKG QTIRFAIKNA GGLDHEFVLD QEDKIMEHKA VMEKFPEMEH DDPNAIRLAA GESGEIIWKF TNDGTFKIAC LVPGHYDVGM HGDVTVAKK
|
| |