Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4307 |
Symbol | |
ID | 5319311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 803330 |
End bp | 804151 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776112 |
Product | transcriptional regulator IclR |
Protein accession | YP_001313045 |
Protein GI | 150376449 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0456166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGA GCGGCAAGGG TAAGCGGGGG CGCAAGGCGG GAGAGAATGC GACGCCGGCC TCCGTTCAGG TGCTGGACAG GAGCCTGTCC CTGCTGGCGA TCATTGCCGA AGGCGACGGC TCGACATTGA CCACGCTTTC GGAGCGGTCC GGCATGGCGC CTTCGACCGT GCATAGGCTG CTTACCTCGC TCGCCCAGCA CGGAATGGTG ACGAACGATA CCGAAACCGG GACATGGACG GTCGGCGTCA AGGCATTCGA GATCGGCAAC GCCTTCCTGC GCTTTCGCAA ACTCGGCACG ATCAGCCGCC CGTTTCTGAA GCGCCTCATG GACGAAAGCG GCGAGACGGC AAATATCGGC ATAGAGGACG ACGGCGACGT CGTTTTCATC TCCCAGGTCG AAAGTCATGC GCCGATGCGC GCCTTCTTCC GTCCGGGACG GCGGGGACCG ATCCACGCTT CTGGCATCGG CAAGGCGATT CTTTCCACCT GGTCCGATAC GGAGATCGCC AAGACTTTGA ACGGCAGGCC ACTGCCATGC TTCACCGGAC GGACGCTTGC CACGCTGCCG GACCTGATCA GGAATGTTCA GGAGATCCGT TTTCGCGGCT GGTCGATCGA TGACGAAGAA CATACGCTCG GCATGCGCTG CATCGCCGCC CCCCTCTTCA ACGAATATGG CGAGGCGATC GGCGGCATCT CGATCTCCGG TCCCAGCGTC CGCGTCGACG ACGAGAGGCT ACGGGTCCTC GGCCCCGCCG TCCGTCGCAC GGCCGACGAA CTGACACGCG CGATCGGCGG GCACCGGCCG GAAGAGGGCT GA
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Protein sequence | MDASGKGKRG RKAGENATPA SVQVLDRSLS LLAIIAEGDG STLTTLSERS GMAPSTVHRL LTSLAQHGMV TNDTETGTWT VGVKAFEIGN AFLRFRKLGT ISRPFLKRLM DESGETANIG IEDDGDVVFI SQVESHAPMR AFFRPGRRGP IHASGIGKAI LSTWSDTEIA KTLNGRPLPC FTGRTLATLP DLIRNVQEIR FRGWSIDDEE HTLGMRCIAA PLFNEYGEAI GGISISGPSV RVDDERLRVL GPAVRRTADE LTRAIGGHRP EEG
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