| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4246 |
|---|
| Symbol | |
|---|
| ID | 5318007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 732514 |
|---|
| End bp | 733578 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640776051 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001312984 |
|---|
| Protein GI | 150376388 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.691572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCCA TCCGAGACCG TCTTCCCGTC TCCATCATCA TAGCGAATTA CAATTATGCC
CGGTTTCTAA ACCGTGCGAT CGACAGCGCG CTCAGTCAGA ACCATGCGAA TGTCGAGGTC
ATCGTCGTCG ACGACGCGTC GACCGACGGG TCCGCAGATG TGATCTCATC CTACGGAGCG
CGGATCAAAG CCTGTCTGAG GAAGGCGAAT GGCGGTCACG CGGCCGCGTT CAACACCGGC
TTCGCCGAAA GTCGAGGGGA GATCGTTTTT TTTCTCGACG CCGACGACTA CCTCTATCCG
ACGGCGGTAT CCGAACTGCT GGCGCGCTGG GATGACGACA CGGCCCAAAT GCAGTTCCGG
CTGCACCTGG TAGACGAGGG GCAGCGCGTG AAGGACATCT TCCCGCCGCT CGAGGTTCCG
TTCGACTCCG GTGACGTCAC GCCGCAACTG GCGCGCCGCG CCCGTTATCA GACGACGGTC
ACCAGCGGAT TGGCTTTCGC GCGCAAGGCC CTGGATGTCA TAATGCCTGT TCCGGAAGTC
GAGTTCCGGC AGGGCGCCGA CGGCTACCTC GTCACGCTTG CACCGCTTTA CGGAAAGGTG
ACGTCGCTCG ATGCCTGCCT CGGTGCCTAT CGGATACATG GGGGCAATCA TTCGGTCTTT
GCCGAGAAAC TCGGACAGAG GGCGCGCTGG CGGGTGGAAC ATGATTTTCA CCGGCTGCAG
GCGCTTACGG AACAGGCCTC CCAAGTCGGA TTGTCGATTT CGCCGAAGGC GAACCTGCGC
GACCCGGTGC ATCTGGAGGA GCGCATCGCG TCGCTCTGCG TGGACAGCGG GCGCCACCCG
GTGGCCGCGG ATTCGAGGCT CGGCCTCGCC GCCGCCGGTG CGGTCGCCAG TATGCGTATG
AATGTCTCGC TGCGCCGCCG TGCGATGCTG GCAGCCTGGT TCGTCTCCGT TGGGCTTCTG
CCGCCGCGCA TGGCGCAGGC GGTACTTTCG TGGAAGCTCG TCTCATCTTC ACGGCCGGCT
TTCCTCATGC GGCTGTCGAG AACCATACGC CACGCCATGG GCTAG
|
|---|
| Protein sequence | MHSIRDRLPV SIIIANYNYA RFLNRAIDSA LSQNHANVEV IVVDDASTDG SADVISSYGA
RIKACLRKAN GGHAAAFNTG FAESRGEIVF FLDADDYLYP TAVSELLARW DDDTAQMQFR
LHLVDEGQRV KDIFPPLEVP FDSGDVTPQL ARRARYQTTV TSGLAFARKA LDVIMPVPEV
EFRQGADGYL VTLAPLYGKV TSLDACLGAY RIHGGNHSVF AEKLGQRARW RVEHDFHRLQ
ALTEQASQVG LSISPKANLR DPVHLEERIA SLCVDSGRHP VAADSRLGLA AAGAVASMRM
NVSLRRRAML AAWFVSVGLL PPRMAQAVLS WKLVSSSRPA FLMRLSRTIR HAMG
|
|---|
| |