| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4105 |
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| Symbol | |
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| ID | 5318994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 567972 |
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| End bp | 568754 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640775912 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001312845 |
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| Protein GI | 150376249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAAC ACCGCCCAGC GGCAGGAAAG CGGGTGGATG GCGGGAGAGA ACGAGCGGGA
AAGCGCGTGA CGCTCGCCCG CGCGCTCTCG AAGCTCGGCT ATTGCACTCG GACCCAGGCC
GAGAAGCTGA TTGCCGAGGG ACGTGTCAGC GTCGGCGGCA GGAGAGTTAC CGATCTGGCT
CACTGGGTCG ATATCGAAGC GGACAGGATT GCCGTGGACG GCACCGTCAT CGCCGCGCAG
CCGAAGGTCT ATCTGATGCT GAACAAGCCG CGGGGGCTCG TAACCACCCG CGACGATCCG
GAGGGTCGGC CGACCGTCTT CACCTGTCTC GAAACCGTCG ACGCCCCGTC TCTCTCACCA
GTCGGCAGGC TGGACAAAGC GAGCGAGGGG CTCCTCCTCT TCACCAACGA CACGGTGCTG
GCGCAGCGCC TGCTCGACCC GCAAACCCAT CTCGGCAAAC GGTACCACGT TCAGGTGCGT
GGCTTCCTCG GCGAGGCCAT GGCGGCGCGG ATGGTCGAGG GCGTAACGGA GGGCGGCGAA
CTGCTGAGAG CCGCGCGGGT CGCGCTCCTG CGGGGCGGCG ACAGGAACAG CTGGATCGAG
GTGGAGCTCA CGGAGGGGCG CAACCGCCAG ATCCGCCGCA TGCTCGACGC ACTTGGCTTC
GAATGCCTGC GCCTGCTGCG CGTCGCGATC GGCGAGGTAA GGCTCGGCGA CCTGCCGAAA
GGGGCAAGCC GGCCGCTGGC GGAAGCGGAG ATTCGCTATC TCAGGCGCCG AACCGGCCTT
TAG
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| Protein sequence | MKQHRPAAGK RVDGGRERAG KRVTLARALS KLGYCTRTQA EKLIAEGRVS VGGRRVTDLA
HWVDIEADRI AVDGTVIAAQ PKVYLMLNKP RGLVTTRDDP EGRPTVFTCL ETVDAPSLSP
VGRLDKASEG LLLFTNDTVL AQRLLDPQTH LGKRYHVQVR GFLGEAMAAR MVEGVTEGGE
LLRAARVALL RGGDRNSWIE VELTEGRNRQ IRRMLDALGF ECLRLLRVAI GEVRLGDLPK
GASRPLAEAE IRYLRRRTGL
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