Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4056 |
Symbol | |
ID | 5318879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 515764 |
End bp | 516474 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775863 |
Product | metallophosphoesterase |
Protein accession | YP_001312796 |
Protein GI | 150376200 |
COG category | [R] General function prediction only |
COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC TGAAGGTGGC CGCCGTGGCG GACCTGCATG TAAAGGAGGA CCGATCGGTC TCCTACACGG ACCTGTTTGC GGAAGTCTCG CGCGCGGCGG ATGTGCTTGT CATTGCCGGC GACCTGACGG ACCTGGGAAA GCCTGCGGAA GCAGAACTGC TCGCCGCGGA TATGAAATCC TGCACCATTC CGGTCGTCGC TGTGCTCGGC AATCATGACC ATCAATGCGA CGCCGTGGAG GAGGTCTCGT CCATTCTTGT GAAAGCGGGT GTGCATCTCC TCGATGGTCA AAGCATCGAA ATCGCGGGCG TCGGCTTCTG CGGAACGAAG GGTTTCATCG GCGGCTTCGG GCGGCACATG CTGGGTGCCT TCGGCGAAGC GGCGATAAAG ACCATGGTCG GAACGAGCGT CGACGAAGCG ATCCGGCTCG AAAACGCATT GAGGGCGACC AGGGCAGAGC GCGCGCTCGT CGTGTTGCAC TACTCGCCCA TTCCCGAAAC CGTCGACGGA GAGCCCAAGG AGATCTATCC GTTTCTCGGG TCCTCGCGTC TTGCGGAGAC CATCGACCGT TTCAAGGTGA GCGCCGTCGT CCACGGCCAT GCCCACAAAG GCGCCTATCA AGGAAAGACA CCCGGCGGGG CTCCGGTCTT CAATGTCGCC GCCCATGTCG AAAAGCCGAC GGGCAGACCC TACGCCATAC TCGAACTCTG A
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Protein sequence | MSKLKVAAVA DLHVKEDRSV SYTDLFAEVS RAADVLVIAG DLTDLGKPAE AELLAADMKS CTIPVVAVLG NHDHQCDAVE EVSSILVKAG VHLLDGQSIE IAGVGFCGTK GFIGGFGRHM LGAFGEAAIK TMVGTSVDEA IRLENALRAT RAERALVVLH YSPIPETVDG EPKEIYPFLG SSRLAETIDR FKVSAVVHGH AHKGAYQGKT PGGAPVFNVA AHVEKPTGRP YAILEL
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