Gene Smed_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4056 
Symbol 
ID5318879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp515764 
End bp516474 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content61% 
IMG OID640775863 
Productmetallophosphoesterase 
Protein accessionYP_001312796 
Protein GI150376200 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC TGAAGGTGGC CGCCGTGGCG GACCTGCATG TAAAGGAGGA CCGATCGGTC 
TCCTACACGG ACCTGTTTGC GGAAGTCTCG CGCGCGGCGG ATGTGCTTGT CATTGCCGGC
GACCTGACGG ACCTGGGAAA GCCTGCGGAA GCAGAACTGC TCGCCGCGGA TATGAAATCC
TGCACCATTC CGGTCGTCGC TGTGCTCGGC AATCATGACC ATCAATGCGA CGCCGTGGAG
GAGGTCTCGT CCATTCTTGT GAAAGCGGGT GTGCATCTCC TCGATGGTCA AAGCATCGAA
ATCGCGGGCG TCGGCTTCTG CGGAACGAAG GGTTTCATCG GCGGCTTCGG GCGGCACATG
CTGGGTGCCT TCGGCGAAGC GGCGATAAAG ACCATGGTCG GAACGAGCGT CGACGAAGCG
ATCCGGCTCG AAAACGCATT GAGGGCGACC AGGGCAGAGC GCGCGCTCGT CGTGTTGCAC
TACTCGCCCA TTCCCGAAAC CGTCGACGGA GAGCCCAAGG AGATCTATCC GTTTCTCGGG
TCCTCGCGTC TTGCGGAGAC CATCGACCGT TTCAAGGTGA GCGCCGTCGT CCACGGCCAT
GCCCACAAAG GCGCCTATCA AGGAAAGACA CCCGGCGGGG CTCCGGTCTT CAATGTCGCC
GCCCATGTCG AAAAGCCGAC GGGCAGACCC TACGCCATAC TCGAACTCTG A
 
Protein sequence
MSKLKVAAVA DLHVKEDRSV SYTDLFAEVS RAADVLVIAG DLTDLGKPAE AELLAADMKS 
CTIPVVAVLG NHDHQCDAVE EVSSILVKAG VHLLDGQSIE IAGVGFCGTK GFIGGFGRHM
LGAFGEAAIK TMVGTSVDEA IRLENALRAT RAERALVVLH YSPIPETVDG EPKEIYPFLG
SSRLAETIDR FKVSAVVHGH AHKGAYQGKT PGGAPVFNVA AHVEKPTGRP YAILEL