Gene Tmel_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1888 
Symbol 
ID5296756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1873975 
End bp1875060 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content30% 
IMG OID640770155 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001307106 
Protein GI150021752 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT ATCTTCCTAC AAAGATCTTT TTCGAAGATA ATTACATACA GTCAATAGAT 
GAAATCAAAA GATTGGGAGA TAAGTTTTTA ATTATAACAG GAAAAAGCTC TAAAATTAAT
AAAAGCTTAG ATGAGCTTTT GAAAATTCTA AATAAACTCA ATAAAAAATA CGAAATATTT
GACGAAACAT TAGAAAATCC CCCAAAAGAA ATGATTAACA ATATAATTGA AAGGTATGGT
AAAAATTGGG ATGTAATCGT TGGCCTTGGT GGAGGAAGTC CTATGGACAC CGCCAAGGCC
GTTGCTGTTC TATGTAAAAA CAATATATCT GTAGAAGAGT TATATGATAG CAATAAATAT
AATTCTGCTG CAAAAATTTT ATGTATCCCA ACAACATCTG GTACAGGGAG TGAAGTTACA
CAATACTCTG TTTTAACAAT TAACAATGTA AAAAAAGGAT TTAAACATGA CGTAATATTT
CCAGATGTTG CTATTTTAGA ACCAAAGTAC ACTTTAACAC TCAATAAGGA ACTAACTGTT
TCAACCGCAT TAGATGCTTT GTCTCATGCT ATAGAAGCTT TTCTATCATT AAGAGCTAAC
TCATTTTCCG ATCTTTATGC ATTAAAGGCT ATCGAAATAA TATCACTTAA CTTAAATAAT
TTAGTTAAAG ATCTTGGAAA CTATGAACTA CGAAAGAAAA TAATGTTGGC TTCTTTGTAT
GCGGGAATTT CAATTGGCAT AACTGGAACC ACTATTGCAC ATTCTCTTGG ATACTCATTA
ACAACAGAGA AAGGAATTAA ACATGGACTT GCTACTGCTG TTTTTTTACC ATTTGAAATA
GAACATTCAA ATTCTTCAAA AGCAAACAAA ATAAAAGAAA TACTAGGTGA TCCATTAGAG
TTTCTAAAAT CACTTAATAT TCTTATTAAA TTTTCCGTTA ACGAAAGAGA AATTGAAGCT
TGGTCACAGA GGGTATTAAA TTCTTCACAT GTTAAGGTAA CACCAGGAAA TTATGACTTT
TCAAAAATAA AAGAAACTTA TAAATGGCTA CTTGAAAAAT CTGGACTATA CGGAGGTAAT
AAATGA
 
Protein sequence
MKFYLPTKIF FEDNYIQSID EIKRLGDKFL IITGKSSKIN KSLDELLKIL NKLNKKYEIF 
DETLENPPKE MINNIIERYG KNWDVIVGLG GGSPMDTAKA VAVLCKNNIS VEELYDSNKY
NSAAKILCIP TTSGTGSEVT QYSVLTINNV KKGFKHDVIF PDVAILEPKY TLTLNKELTV
STALDALSHA IEAFLSLRAN SFSDLYALKA IEIISLNLNN LVKDLGNYEL RKKIMLASLY
AGISIGITGT TIAHSLGYSL TTEKGIKHGL ATAVFLPFEI EHSNSSKANK IKEILGDPLE
FLKSLNILIK FSVNEREIEA WSQRVLNSSH VKVTPGNYDF SKIKETYKWL LEKSGLYGGN
K