Gene Tmel_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1758 
Symbol 
ID5296835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1746374 
End bp1747339 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content29% 
IMG OID640770030 
Productpeptidase M23B 
Protein accessionYP_001306982 
Protein GI150021628 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000326005 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTTTTCAAGT CATATTGTTA CTTTTCTCAT TTTTATCGAT TGCAAATTTT 
ATTCCTCCAG TGGATGATAG TTATTTAACA TCTTCTTTTG CTGAGTTTAG AAGTACGGGT
AACCTTCCAC ATTTTCACGG TGGAATTGAT TTTAGCACAT TTTCAAAAGA AGGAATTCCT
ATTAAAGCTA TTTATGAGGG GTATGTTGTA AGAATTGAAC TTAATGATCC AATTTATGGA
AATGTTATTG TGTTACAACA TCCTAATGGT TATCGTTCTC TTTATGCTCA TTTAAGTTCA
TTTAATTATA TAATCCAATC TATTGTTGAT GATCTTATAA AAGAGTTTCC AAACGAAAAG
ATTGTTGTAA GGTTTCCGGA GGATGAAATA CTGTTTGCCC AAGGAGATAT TATTGCATAT
TCTGGTAAAA CAGGCGAAGC GGTAAAACCA CATTCGCATG TTGAAATAAG GAATCATGAT
GAAACTATTT TGTTTGATCC TTTGGATTTT ATTAAGATTA ATCCCCCGGA TGGGAATATT
GTGTTAAAAG AATTAATAAT TAATGGTAAA AAGGTAGAAT ATCATAAAGA TGCTGTGTAT
ACTTTTTCTG GGGAATTTCC TAAAATTGAA ATTAATTCTT ATTTAAAAGT TAACAGTAAT
TTATTAGGTC TTAAAGAAAT AAAGCTTTAC ATTGCAAATA AATTGGTGTA TCATATAATT
CTTGATGAGA TACCTTTGGA TATATTTTAC AAACCGTATA TAATCTATAC AAAAGATTCA
ATAGCTGCTG GGTATATTTA TAAATCATAT TATAGATTAT ATCCGGAAGC TGTTGGAGGT
CCAATTAAAG TAAATAATTT TCCAACGTTG AATACTAATT TAGCTTTCTT TCAAGTAAGG
ATTGAGACTT ATGATCCATG GGGAAGGAAA AAGGAGTTTA GTTTTAATTT AAAACGGGAG
ATGTGA
 
Protein sequence
MKKFFQVILL LFSFLSIANF IPPVDDSYLT SSFAEFRSTG NLPHFHGGID FSTFSKEGIP 
IKAIYEGYVV RIELNDPIYG NVIVLQHPNG YRSLYAHLSS FNYIIQSIVD DLIKEFPNEK
IVVRFPEDEI LFAQGDIIAY SGKTGEAVKP HSHVEIRNHD ETILFDPLDF IKINPPDGNI
VLKELIINGK KVEYHKDAVY TFSGEFPKIE INSYLKVNSN LLGLKEIKLY IANKLVYHII
LDEIPLDIFY KPYIIYTKDS IAAGYIYKSY YRLYPEAVGG PIKVNNFPTL NTNLAFFQVR
IETYDPWGRK KEFSFNLKRE M