Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1378 |
Symbol | lysS |
ID | 5298251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1379590 |
End bp | 1381098 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769651 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001306610 |
Protein GI | 150021256 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAAGGG AGTTTAGAGA GCAAAGAATA AAAGAAATTG AACAATTAAA AAGGAAAAAC ATAAACCCTT ATCCGAATAG ATTTGATAAA ACTCATACTA GTGAAATGAT AAAAAAGGAA TTTGAAGGAT TAAATCCAGG AGAGGTAAAA GATGATGTGT TTGTATCAAC TGCGGGAAGA ATAATGTCTT TAAGAAAACA TGGTAAGAGT GCATTTTTCC ACATAAAGGA TTTTTACGGT AGGATACAAG CGTATATACG AAAAGATGTT GTTGGCGAAG AAGCTTATGA ATTTTTTAAA GAACATATTG CAATTGGAGA TATTGTAGGT GTTAAGGGGA ATGTTTTTAA GAGTAAAACG GGTGAAATTA CTATTTTAAT TAAAGAGATA AAGCTTTTAA ATAAGCCATT AAGACCAATG CCTGAAAAGT GGCATGGTAT TAAGGATAAA GAGGTTTTGT ATAGGCAAAG ATATGTTGAC ATGATAGCAA ACGATGATAC ATTAAATAGA TTTAAAGTTA GATTTGAGGT TATAAAATTG ATAAGGGATT TTTTGAATTC AAAAGGTTTT ATAGAAGTTG AAACTCCAAT TTTGGAATAT GTAACAGGTG GTGCTTCTGC TAGGCCCTTT GTGACTCATT TAAATGTGTT TGACATTGAA ATGTATATGA GAATAGCTAC CGAGTTGTAT TTAAAAAGGT TTATAGTAGG TGGTTTTGAA AAGGTTTATG AATTAGGTAA GAATTTCAGA AATGAAGGTT TGTCATATAA ACATCATCCT GAGTTTACAT CTATAGAAAT TTATCAAGCG TATGCAGATT ATGAGGATAT GATGAACCTT ACGGAAGAGT TGTTTGTGTA TATAGTGGAA AAGTTGTTTG GTACTACAAA GATAAAATAT CAAAATGTAG AATTGGATTT TTCAAGACCT TGGAGAAGGA TTAAGATGAG AGACTTTATT AAGGAACATT TAGGCGTAGA TATTTTAGAA GATTCAATGG GAAGAATGAT GGATGTGTTG GAAGAACATG GTGTAGAAGT TGAAATAAGA GATAAGGGTC ATATGATTGA GAAACTTTGG GATTTAGTTG AAGATAAGGT AGTTCAACCT ACTTTTTTAC TTGAACATCC TGTGGAAATT TCACCACTTG CAAAGAAACA CAGGGAAGAT CCACGTGTTA CTGAGAGATT TGAGTTGATA ATTTATGGCA GGGAAATGGC CAACGCATTT AGTGAGCTTA ATGATCCAGT TGATCAGTAT GAGAGGTTTT TAAAGCAAGT AGAGCTTAGA GAAGCAGGTG ATGAAGAAGC TCAAATGATG GATAGGGATT TTGTTAGGGC TTTGGAGTAT GGTATGCCAC CAACTGGTGG GTTAGGGATA GGCATTGATA GGTTAGTAAT GTTACTTACA AATTCAGCTA CAATTAGGGA TGTTATAGCA TTTCCGTTGG TAAGGCTAAA ATCTTTTGAA GAAGAAGAGC TAGATATAGA AGGGGGTTCG CAAGAATGA
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Protein sequence | MLREFREQRI KEIEQLKRKN INPYPNRFDK THTSEMIKKE FEGLNPGEVK DDVFVSTAGR IMSLRKHGKS AFFHIKDFYG RIQAYIRKDV VGEEAYEFFK EHIAIGDIVG VKGNVFKSKT GEITILIKEI KLLNKPLRPM PEKWHGIKDK EVLYRQRYVD MIANDDTLNR FKVRFEVIKL IRDFLNSKGF IEVETPILEY VTGGASARPF VTHLNVFDIE MYMRIATELY LKRFIVGGFE KVYELGKNFR NEGLSYKHHP EFTSIEIYQA YADYEDMMNL TEELFVYIVE KLFGTTKIKY QNVELDFSRP WRRIKMRDFI KEHLGVDILE DSMGRMMDVL EEHGVEVEIR DKGHMIEKLW DLVEDKVVQP TFLLEHPVEI SPLAKKHRED PRVTERFELI IYGREMANAF SELNDPVDQY ERFLKQVELR EAGDEEAQMM DRDFVRALEY GMPPTGGLGI GIDRLVMLLT NSATIRDVIA FPLVRLKSFE EEELDIEGGS QE
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