| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0948 |
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| Symbol | rpsL |
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| ID | 5297674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 984053 |
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| End bp | 984427 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640769232 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001306194 |
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| Protein GI | 150020840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000100992 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTACAA TTAATCAGTT GGTAAGGCAT GGTAGAAAAG TAATAAAGGA AAAATCAAAA
TCTCCAGCGT TGCAAGGTCA TCCACAAAAG AGAGGAGTTT GTGTTAGGGT TTCAACAATG
ACTCCAAAAA AGCCAAACTC AGCTTTGAGA AAAATTGCAA GGGTAAGATT AAGTAATGGG
ATAGAAGTGA CTGCGTATAT TCCAGGTATA GGTCATAATT TGCAAGAACA CTCTGTTGTA
TTGGTTAGAG GTGGAAGGGT TAAGGACTTA CCAGGTATTA GGTATAAAAT AATAAGAGGA
GCGTTGGACA CAGATGGTGT TGAAAATAGA AAACAATCAA GAAGTAAGTA TGGAACAAAG
AGACCTAAGA AATAA
|
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| Protein sequence | MPTINQLVRH GRKVIKEKSK SPALQGHPQK RGVCVRVSTM TPKKPNSALR KIARVRLSNG
IEVTAYIPGI GHNLQEHSVV LVRGGRVKDL PGIRYKIIRG ALDTDGVENR KQSRSKYGTK
RPKK
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