Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0770 |
Symbol | |
ID | 5298056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 812334 |
End bp | 813701 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769048 |
Product | alpha amylase, catalytic region |
Protein accession | YP_001306017 |
Protein GI | 150020663 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGGTT ATGAAATTTA TATCCGCTCT TTTTACGATT CAAATGAGGA TGGAATAGGT GATTTTAAAG GGATTACAAA TTCTGTTTCT TATTTGAAAG ATTTGGGAGT TGACCTTATT TGGATTATGC CGCATTTTAA AGCGCCAAGT TACCATGGAT ATGACATTAT CGATTTTTAC GATACAAATT TATCTTATGG AACACAAAAA GAGTTTAAAG AGATGGTTAA TGTTTTACAT GAAAATGGGA TAAGGATTGC TATTGATTTA CCTTTAAATC ACGTATCTTC TAGACATCCT TGGTTTAAAG CTGCTTTAGA AGGTGATAGA AAGTACAAAG ATTATTTTTT ATGGGCAGAT AAAGATGTGG ATTTAAACGA GAAAAGACCT TGGGACGAAG AAGTTATATG GCATCCATAC AAGGGAGAAT GGTATTATGG TGTCTTTGGA GGTTCTTCGC CTGATTTAAA TTATGAAAAT GAGGAAGTTA TAGAGGAAGC ACTAAAAATA ATAGAGTTCT GGCTTAACTT GGGAGTCGAT GGATTTAGAT TTGATGCTGC AAAACATATT TATGATTATG ATTTAGATAA AAAAAGATTT TCTTACAACC ATGAAAAGAA TATACAATTT TGGAAAAAGG TAATGGAAAA GGCAAGGAAT ATAAAAGAAG ATGTATTTGC CGTGACTGAG GTGTGGGATG ATCCAGAGAT AGTTATGGAA TATGCGAAGG TTATAGGTTG TTCTTTTAAT TTTTACTTTA CTGAGGCTTT AAGGGAATCT ATAACTAACG GATACACACA CAAGATATGG GATTGTTTTT CTAGAACACT TACGGATAAT AGAAATTTAT ATATTCCTTC CAATTTTTCG GGAAATCACG ATATGACAAG ATTAGCTTCT GCAATAACAT CACAAGAACA AAGAAAAGTA TTTTTTGCGA TGCTTCTTAC AACTCCTGGC ATTCCATTTA TATACTACGG TGATGAAATT GGAATGAAAG GTATATACGA TCCATATTTT ACCGAAAGTG TTATAGAACC TATGCCATGG TATGCTTCAC TTTCAGGTGA TGGTCAGACA CTTTGGAAAT CTGTGGGTTT TAACCGTGCA TTTACGGGAG TATCTGTTGA GGAACAATTA AAAAGAGAAG ATAGTTTATT AAATACAGTA AAGGGTTGGA TAAGATTTAG AAAAGAAAAT AGTTGGTTAA CAAACTCATG GATTGAAGAT TTAAAAACAA GCGAATTTGT TGTAGCATAC ACAGTAACCA ATGGAAACAA GGCGTTCAGG GTTTATCATA ATGTAGCTGG CCATAAGGAG GAATTTGAAG GAATAAAGTT AAAACCATTT GAGTCTAAGG TGTTTTAA
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Protein sequence | MIGYEIYIRS FYDSNEDGIG DFKGITNSVS YLKDLGVDLI WIMPHFKAPS YHGYDIIDFY DTNLSYGTQK EFKEMVNVLH ENGIRIAIDL PLNHVSSRHP WFKAALEGDR KYKDYFLWAD KDVDLNEKRP WDEEVIWHPY KGEWYYGVFG GSSPDLNYEN EEVIEEALKI IEFWLNLGVD GFRFDAAKHI YDYDLDKKRF SYNHEKNIQF WKKVMEKARN IKEDVFAVTE VWDDPEIVME YAKVIGCSFN FYFTEALRES ITNGYTHKIW DCFSRTLTDN RNLYIPSNFS GNHDMTRLAS AITSQEQRKV FFAMLLTTPG IPFIYYGDEI GMKGIYDPYF TESVIEPMPW YASLSGDGQT LWKSVGFNRA FTGVSVEEQL KREDSLLNTV KGWIRFRKEN SWLTNSWIED LKTSEFVVAY TVTNGNKAFR VYHNVAGHKE EFEGIKLKPF ESKVF
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