| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0704 |
|---|
| Symbol | |
|---|
| ID | 5297633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 741557 |
|---|
| End bp | 742264 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640768984 |
|---|
| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
|---|
| Protein accession | YP_001305953 |
|---|
| Protein GI | 150020599 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAC TTGTAGGAAT TGGTCCGGGA AATATTGATA ACATGACACT AAAGGCTATT
AACTCTATAA AAGAAGCAGA TGTTGTCTTG GGATATTCTA CATATATAAA CCAAATAAGG
TCATTGCTTG AGAATCAAAA TGTTATTGAG TATGCCATGG GTGAAGAAGA AAAACGATGT
AAAGATGCTA TTAAGTTAAG CAAAGAAGGG TATAATGTTG CATTAATTTG TGGAGGAGAT
CCTAATATAT ACAGTCTTTC AAACATTTTA CTCAACTTAA CAGATGAAAT AGAGATAATA
CCCGGTGTAA CCGCATTAAG CTCTTGTGCT AGCTTAATAG GTGCTCCTTT AAACGATTTT
GCAGTTATTA GTTTATCAGA TTATAACATT TCCTTAGAAA ATATAACTAA AAGAATTGAA
TATGCGGCAA AAGCAGATTT GGTAATGATC TTGTACAATC CAACAAGCAA AGTAAGAAAA
AAGAAAACAA AAAGGATTTT AGAAACTATT ATCTCTATAA AACCACCAAA AACCAAAGTA
GCACTTGTTA AAAATTGCTA CAGAAAAAAT TTCACTTACA AAATTATTAA CCTTTCAAAT
ATACTAAATA ACTTAGATTT TATAGATATG AATACAACTA TAATCATTGG CAACAAATAT
TCTTTCGAAA AAAATAAAAA ACTTATTACC CCAAGGTGGT ACAAGTGA
|
|---|
| Protein sequence | MIKLVGIGPG NIDNMTLKAI NSIKEADVVL GYSTYINQIR SLLENQNVIE YAMGEEEKRC
KDAIKLSKEG YNVALICGGD PNIYSLSNIL LNLTDEIEII PGVTALSSCA SLIGAPLNDF
AVISLSDYNI SLENITKRIE YAAKADLVMI LYNPTSKVRK KKTKRILETI ISIKPPKTKV
ALVKNCYRKN FTYKIINLSN ILNNLDFIDM NTTIIIGNKY SFEKNKKLIT PRWYK
|
|---|
| |