Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0459 |
Symbol | |
ID | 5297863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 483861 |
End bp | 486389 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640768720 |
Product | pullulanase, type I |
Protein accession | YP_001305711 |
Protein GI | 150020357 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02104] pullulanase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.712908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAT TGTTAGTGTT TTTCTTTGTT TTGTTATCTT TTATTGCAAT TTCATCTACA ACCATAATTG TACATTACCA TCGTTTCGAT GGTAACTACA ATGGATGGAA CTTGTGGATT TGGCCTATGA AACCCATAGC AATGGAAGGA AAATCCTATC AATTTACAGA TCAAGATAAT TTTGGTGTAG TAGCTAAGAT AACACTTGAC CTGGATCTTG AACAGGTGGG AATAATCGTA AGGCTCAACG ATTGGCAAGC AAAAGATGTA GCAAAAGATA GGTTTATAGA CATAAAAGAT GGAAAAGCGG AGGTGTGGAT TTTGCAAGGA GTCGAGGAAA TTTACACAAA AAAACCTGAT ACAAGGCCAA GGGTATTTTT CGCAGCTGCA AAAGCAGATA ATGTAATTGA AGCATATTTA ACAAATACAG TTGACACAAA GAATGTAAAT ATAAAAGTTA AAGTAGATGG CAAAGAAAAG AAAGTATTAA ATGTGGAAAA AGCAGATCCA ACGGATCTTT CTAAGACAAA TTACATAAGA ATAACTTTAG CAGATAAATT AACTGAAGAT GATTTAAAAA AAGATGTTAA AATATATATC GAGGGCTTCT CTCCGTCTAC TGTTTATATG TTAGATGTTT TAGACAAATT TTATTTTGAA GGTGAGCTCG GTTACATATA CTCCAAAAAC AGGACCATAT TTAGGACCTG GTCTCCTGTT TCAAAATCTG CACAAGTTTT ATTGTATAGA AACGGAGAAG ACAAAAAACC ATACAAAATA GTTAATATGA AATACATGGG AAATGGTGTA TGGGAGGCCA GGGTTGATGG TGACTTAGAT GGTATCTTTT ACAAATACAG ATTTGAAAAT TACGGCAAAA TAAGGGAAAC AGTAGATTAT TATTCCAAAG CTGTATATAA AAATGGATTA AAAAGTGCAG TTGTTGATCT TTCAAAGACA AATCCTGATG GTTGGTTCAA TGATAAAAGA CCATACATGA AAACACCCGA AGATGCAATA ATTTACGAAA TTCACATTGC TGATATAACT GGCCTAGAAA ATTCAGGTGT AAAAAACAAA GCAACGTATC TGGGATTGAC AGAAGAAGGA ACAAAAGGGC CAGGCGGTGT AACTACAGGA TTGTCTCATC TTGTAGAGCT TGGGATTACT CATGTTCATA TCTTACCCAT ATTTGATTTT TACACGGGCG ATGAGGAAAA TAAAAATTTC GAAAAAAGTT ATAATTGGGG ATACGACCCA TATCTCTTCA CTGTACCTGA AGGAAGATAC TCAACAGATC CAAAAAATCC ATACGCTAGA ATAATAGAAG TCAAAAAAAT GATTCAAAAG CTTCACGAAA ATGGAATTAG AGTAATACTT GATATGGTCT TCCCACATAC ATTTGGAATA GGTGAACTTT CCGCCTTTGA TCAAACAGTA CCATATTACT TTTACAGACT TGATAAAACA GGAGCATATT TAAATGAAAG TGGTTGTGGA AATGTGATAG CAACGGAAAG ACCGATGATG AGAAAATACA TAGTAGATAC AATTTTGTAT TGGATTAATG AATATCACGT GGATGGATTT AGATTTGATC AAATGGGCCT AATAGATAAA AAAACTATGC TAGAAATTGA AAGAAAAGCA CACAAAATTG ATAAGACGAT TATATTATAT GGTGAACCTT GGGGAGGTTG GGGAGCACCA ATTAGGTTTG GTAAATCTGA CGTTGCACAT ACACACATTG CAGCATTCAA TGATGAATTT AGAGATGCAT TAAGAGGTTC TGTATTTGAT GAAAAGGTAA AAGGATTTTT AATGGGGGCT ATTGGAAAAG AAACACGCGT TAAAAGAGGA GTTGTTGGAA GTATTCAATA TAATTCACGA ATAAAAAGCT TTGCGGCAGA TCCTGAAGAA ACTATTAATT ACGTTGCATG TCATGATAAT CATACATTGT GGGATAAAAA TTACCTTGCG GCAAAATACG ATAAAAAATA TAAATGGACA GATGAAATGT TAAGAAACGC ACAAAAACTT GCTGGTGCTA TACTTTTAAC ATCACAGGGA ATTCCTTTTA TTCATGCTGG TCAAGATTTC GCACGTACAA AGAATTTCAA CGAAAATTCT TACAATGCAC CTATTTCCAT TAACGGATTA GACTATCAAA GAAAATACGA ATATTTAGAT GTATTTGAAT ATTACAAAGG ACTTATTAAA CTAAGAAAGG GGCACCCGGC ATTTAGAATG ACAAATGCAC AAGAAATAAA AGAACACATC AAATTTTTAC CCAGCAGAAA AAGAAGAATA GTTTCTTTTG TCATATCCAA TCACGCAAGA AATGACGAAT GGAAAGATAT TTTGGTAATA TATAATGGAA ATGTTGATTC TGTAGAATAT GAACTTCCTG AAGGCGAATG GAATATGATA GTAAATGGGA AAATTGCAGG AACTGACATT ATTGAAAAAG TTTCTGGTAA AATAATACTC GAAGGAATTT CTGCATATGT TTTTTACAAG AACAAATAA
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Protein sequence | MKRLLVFFFV LLSFIAISST TIIVHYHRFD GNYNGWNLWI WPMKPIAMEG KSYQFTDQDN FGVVAKITLD LDLEQVGIIV RLNDWQAKDV AKDRFIDIKD GKAEVWILQG VEEIYTKKPD TRPRVFFAAA KADNVIEAYL TNTVDTKNVN IKVKVDGKEK KVLNVEKADP TDLSKTNYIR ITLADKLTED DLKKDVKIYI EGFSPSTVYM LDVLDKFYFE GELGYIYSKN RTIFRTWSPV SKSAQVLLYR NGEDKKPYKI VNMKYMGNGV WEARVDGDLD GIFYKYRFEN YGKIRETVDY YSKAVYKNGL KSAVVDLSKT NPDGWFNDKR PYMKTPEDAI IYEIHIADIT GLENSGVKNK ATYLGLTEEG TKGPGGVTTG LSHLVELGIT HVHILPIFDF YTGDEENKNF EKSYNWGYDP YLFTVPEGRY STDPKNPYAR IIEVKKMIQK LHENGIRVIL DMVFPHTFGI GELSAFDQTV PYYFYRLDKT GAYLNESGCG NVIATERPMM RKYIVDTILY WINEYHVDGF RFDQMGLIDK KTMLEIERKA HKIDKTIILY GEPWGGWGAP IRFGKSDVAH THIAAFNDEF RDALRGSVFD EKVKGFLMGA IGKETRVKRG VVGSIQYNSR IKSFAADPEE TINYVACHDN HTLWDKNYLA AKYDKKYKWT DEMLRNAQKL AGAILLTSQG IPFIHAGQDF ARTKNFNENS YNAPISINGL DYQRKYEYLD VFEYYKGLIK LRKGHPAFRM TNAQEIKEHI KFLPSRKRRI VSFVISNHAR NDEWKDILVI YNGNVDSVEY ELPEGEWNMI VNGKIAGTDI IEKVSGKIIL EGISAYVFYK NK
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