Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0230 |
Symbol | |
ID | 5298423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 234297 |
End bp | 234827 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640768486 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_001305489 |
Protein GI | 150020135 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000355363 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGGA GATCAACTAC AGTAGTTTGT GTTAGAAAAA ATGATTCTGT TGTGATGGTT TCAGACGGCC AGGTTACATA TGGAAATACC ATAATGAAGG GTAATGCAAA GAAGGTTAGA AAAATGGGAG AAGGTAATGT TTTAGCGGGT TTTGCTGGTT CGGTTGCAGA TGCAATGGCA CTTTTTGACA GATTTGAAGC AAAATACAGA GAATGGGGGG GCAATTTATT AAAATCAGCT GTTGAACTTG CAAAAGATTG GAGAACAGAT AGGGTGTTAA GAAGATTAGA AGCTTTGCTT TTGGTAGCGG ATAAAAAATA TACGTTTATA ATTTCGGGAA CAGGTGAAGT GATACAACCT GAAGATGATA TAGCATCTAT AGGCTCAGGT TCGCCATATG CCATTGCGGC AGGTAGAGCT CTTTTAAAAC ATACAAATTT ATCTGCAAAG GAAATTGCAT TGGAATCAAT TAGAATTGCA AGTGAAATTT GTATATATAC CAATGATAAT TTTACAATAG AGGAGTTGTA A
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Protein sequence | MKWRSTTVVC VRKNDSVVMV SDGQVTYGNT IMKGNAKKVR KMGEGNVLAG FAGSVADAMA LFDRFEAKYR EWGGNLLKSA VELAKDWRTD RVLRRLEALL LVADKKYTFI ISGTGEVIQP EDDIASIGSG SPYAIAAGRA LLKHTNLSAK EIALESIRIA SEICIYTNDN FTIEEL
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