| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0224 |
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| Symbol | |
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| ID | 5298301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 230324 |
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| End bp | 231529 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768480 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001305483 |
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| Protein GI | 150020129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000279933 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA AAAACTACAT TATTACGTCT TTTATTTTGT TTGGAGTTTT TTTGACATCT
ATATTTTTAA GTGGAGCAAC TGAGAAAACG TTTCAGGAGC ATCTAACACC ACTTGCGGAA
ACTCTTTACT ATATCTTAAA CTATTATTAC GATATGGATA ATGTAGATGT AAATAAAGTA
ATAGATTATG GTATTGACGG TTTGATAAAA GGGTTAGGAG ATGATTTTAG TTATTACTAT
AACGTTGAGT TGTTTAAGGA AAGGGAAATT GAAAATAAAG GTGAATATGG TGGACTTGGT
ATAGAAGTTA CGTATGATCC AGATGCAAGG GCGATCAAGA TTATTAGCCC AATGTATGGA
ACACCTGCAT GGAAGGCTGG ACTAAAGGCG GGGGATTTAA TAATAAGTAT TGATGGGACA
CCTGTAAAGG ATATTTCATA CCTTGATGCA GTGAATATGA TGAGAGGAGA GCCTGGTACA
ATCGTAAAAC TTACCGTGTT GAGAAATGAT GAAATCTTAG AATTTAAAAT TAAAAGGGAA
ATAATCAAAA TTACACCTGT AAAATATGGA TTTGTTGAAA CAGAAATGGG TAGAATAGGT
TATGTTAGAC TTACCCAGTT TAATCAACCA TCTTCCAAAA AGTTGGAAGA AGCGTTACAA
AAGATATATG ATAAAGGGGT AACTGCGTTG ATTTTTGATT TAAGGGATAA TCCTGGTGGT
TATTTAGATA GTGCTATAGA TGTTGCAAGT ATGTTTTTGG AAAGTGGAAA GTTAATAGTA
ACAGTTGAAC CTAGAGTTGG TCAGGTGGAG CGGTATGTGA GTAAAGGAAA TAATTTTCAA
AATGTTCCTG TGGTTATTTT GGTAAATGGT GGTTCTGCAT CTGCTTCTGA GATTGTCACG
GGTGCACTCA AAGAGAACAA CAGAGCGGTT ATTATAGGTG AGAGGACATT TGGAAAAGGC
TCAGTACAAC AAGGATTTCC ATTGAGTAAT GGTGGAATGG TTTACATTAC AATAGCACAT
TACAAAACAC CAAGTGGAAA TGATATACAT AAAGTTGGTA TTGAACCAAA TATTTTTGTG
ACTGGTGATG CAACCAAAGT AGAGCACGAA CGAGTAGTGG TTGATTATAC AAAAGAATTT
ACGGAAGTTG ATACAAACGA TCCATATATA AAGAGAGCTT TAGAATATTT GCTTGAGGGA
AAATGA
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| Protein sequence | MNKKNYIITS FILFGVFLTS IFLSGATEKT FQEHLTPLAE TLYYILNYYY DMDNVDVNKV
IDYGIDGLIK GLGDDFSYYY NVELFKEREI ENKGEYGGLG IEVTYDPDAR AIKIISPMYG
TPAWKAGLKA GDLIISIDGT PVKDISYLDA VNMMRGEPGT IVKLTVLRND EILEFKIKRE
IIKITPVKYG FVETEMGRIG YVRLTQFNQP SSKKLEEALQ KIYDKGVTAL IFDLRDNPGG
YLDSAIDVAS MFLESGKLIV TVEPRVGQVE RYVSKGNNFQ NVPVVILVNG GSASASEIVT
GALKENNRAV IIGERTFGKG SVQQGFPLSN GGMVYITIAH YKTPSGNDIH KVGIEPNIFV
TGDATKVEHE RVVVDYTKEF TEVDTNDPYI KRALEYLLEG K
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