| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11604 |
|---|
| Symbol | |
|---|
| ID | 5222283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1783832 |
|---|
| End bp | 1784554 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640606363 |
|---|
| Product | REP13E12 repeat-containing protein |
|---|
| Protein accession | YP_001287549 |
|---|
| Protein GI | 148822795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 216 |
|---|
| Plasmid unclonability p-value | 1.81222e-18 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 218 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGCCA AACTGGCCGC CCCCGGCGCG ACCAACCCCG ACGACCACAC CCCGGTCATC
GACACCACCC CCGATGCGGC CGCCATCGAC CGCGACACCC GCAGCCAAGC CCAACGCAAC
CACGACGGGC TGCTGGCCGG GCTGCGCGCG CTGATCGCCT CCGGGAAACT GGGCCAACAC
AACGGTCTTC CCGTCTCGAT CGTGGTCACC ACCACCCTGA CCGACCTGCA AACCGGCGCC
GGCAAGGGCT TCACCGGCGG CGGCACCCTG CTACCCATGG CCGATGTGAT CCGCATGACC
AGCCACGCCC ACCACTACTC CCCCGCAAGC GGGAGGTACC CCCAGGCGAT CTTCGACCAC
GGCACACCCC TGGCGCTGTA TCACACCAAA CGCCTAGCCT CCCCGGCCCA GCGGATCATG
CTGTTCGCCA ACGACCGCGG CTGCACCAAA CCCGGCTGTG ACGCACCGGC CTACCACAGC
CAAGCCCACC ACGTCACCGC CTGGACCAGC ACCGGACGCA CCGACATCAC CGACCTCACC
CTGGCCTGCG ACCCCGACAA CCGACTCGCC GAAAAAGGCT GGACCACCCA CAAAAACACC
CACGGCCACA CCGAATGGCT ACCACCACCC CACCTCGACC ACGGCCAACC CCGCACCAAC
ACCTTCCACC ACCACGAGAA GCTGCTACGC CACAACGACG AGGACAACCA CGACGATCCG
TGA
|
|---|
| Protein sequence | MLAKLAAPGA TNPDDHTPVI DTTPDAAAID RDTRSQAQRN HDGLLAGLRA LIASGKLGQH
NGLPVSIVVT TTLTDLQTGA GKGFTGGGTL LPMADVIRMT SHAHHYSPAS GRYPQAIFDH
GTPLALYHTK RLASPAQRIM LFANDRGCTK PGCDAPAYHS QAHHVTAWTS TGRTDITDLT
LACDPDNRLA EKGWTTHKNT HGHTEWLPPP HLDHGQPRTN TFHHHEKLLR HNDEDNHDDP
|
|---|
| |