| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10434 |
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| Symbol | def |
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| ID | 5221098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 520973 |
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| End bp | 521566 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640605175 |
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| Product | peptide deformylase |
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| Protein accession | YP_001286379 |
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| Protein GI | 148821625 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 343 |
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| Plasmid unclonability p-value | 0.0367345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 217 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTCG TACCCATCCG CATCGTGGGC GATCCCGTCT TACACACTGC GACCACACCG
GTGACGGTCG CCGCCGACGG TTCACTCCCG GCGGATCTCG CCCAGTTGAT CGCCACCATG
TACGACACCA TGGACGCCGC CAACGGAGTC GGCCTGGCTG CCAACCAGAT CGGCTGCAGC
CTGCGGCTCT TCGTCTACGA TTGCGCCGCG GACCGCGCAA TGACCGCCCG CCGACGCGGT
GTGGTCATCA ATCCGGTGCT TGAGACCTCC GAAATACCTG AGACCATGCC CGACCCGGAC
ACCGACGACG AAGGCTGTCT GTCGGTTCCC GGCGAGTCAT TTCCTACCGG ACGCGCGAAG
TGGGCACGAG TCACCGGACT CGACGCCGAT GGCAGTCCGG TCAGTATCGA GGGCACCGGC
CTGTTCGCGC GGATGCTGCA GCACGAAACC GGGCACCTTG ATGGATTCCT GTACCTGGAC
CGCCTCATCG GCCGGTACGC CCGCAACGCC AAACGGGCCG TCAAGTCACA TGGCTGGGGC
GTTCCCGGAC TGTCGTGGCT GCCCGGCGAG GACCCCGACC CGTTCGGTCA CTAA
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| Protein sequence | MAVVPIRIVG DPVLHTATTP VTVAADGSLP ADLAQLIATM YDTMDAANGV GLAANQIGCS
LRLFVYDCAA DRAMTARRRG VVINPVLETS EIPETMPDPD TDDEGCLSVP GESFPTGRAK
WARVTGLDAD GSPVSIEGTG LFARMLQHET GHLDGFLYLD RLIGRYARNA KRAVKSHGWG
VPGLSWLPGE DPDPFGH
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